Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcc2Q6PDG5 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcc2Q6PDG5 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcc2Q6PDG5 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.82■□□□□ 0.6
Smarcc2Q6PDG5 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcc2Q6PDG5 Gm27742-201ENSMUST00000184667 60 ntBASIC18.82■□□□□ 0.6
Smarcc2Q6PDG5 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.82■□□□□ 0.6
Smarcc2Q6PDG5 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcc2Q6PDG5 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcc2Q6PDG5 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcc2Q6PDG5 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcc2Q6PDG5 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcc2Q6PDG5 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcc2Q6PDG5 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcc2Q6PDG5 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcc2Q6PDG5 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcc2Q6PDG5 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcc2Q6PDG5 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcc2Q6PDG5 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcc2Q6PDG5 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcc2Q6PDG5 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Smarcc2Q6PDG5 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Smarcc2Q6PDG5 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcc2Q6PDG5 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcc2Q6PDG5 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcc2Q6PDG5 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcc2Q6PDG5 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Smarcc2Q6PDG5 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Smarcc2Q6PDG5 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcc2Q6PDG5 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.81■□□□□ 0.6
Smarcc2Q6PDG5 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcc2Q6PDG5 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcc2Q6PDG5 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcc2Q6PDG5 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcc2Q6PDG5 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcc2Q6PDG5 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcc2Q6PDG5 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcc2Q6PDG5 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcc2Q6PDG5 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcc2Q6PDG5 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.8■□□□□ 0.6
Smarcc2Q6PDG5 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcc2Q6PDG5 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcc2Q6PDG5 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcc2Q6PDG5 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.8■□□□□ 0.6
Smarcc2Q6PDG5 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcc2Q6PDG5 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcc2Q6PDG5 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.8■□□□□ 0.6
Smarcc2Q6PDG5 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Smarcc2Q6PDG5 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcc2Q6PDG5 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcc2Q6PDG5 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcc2Q6PDG5 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcc2Q6PDG5 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcc2Q6PDG5 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcc2Q6PDG5 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcc2Q6PDG5 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Smarcc2Q6PDG5 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcc2Q6PDG5 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcc2Q6PDG5 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcc2Q6PDG5 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcc2Q6PDG5 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.79■□□□□ 0.6
Smarcc2Q6PDG5 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Smarcc2Q6PDG5 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcc2Q6PDG5 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcc2Q6PDG5 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcc2Q6PDG5 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcc2Q6PDG5 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Smarcc2Q6PDG5 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.79■□□□□ 0.6
Smarcc2Q6PDG5 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.79■□□□□ 0.6
Smarcc2Q6PDG5 Gm9103-201ENSMUST00000119371 405 ntBASIC18.79■□□□□ 0.6
Smarcc2Q6PDG5 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.79■□□□□ 0.6
Smarcc2Q6PDG5 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.79■□□□□ 0.6
Smarcc2Q6PDG5 Gm17807-201ENSMUST00000186869 298 ntBASIC18.79■□□□□ 0.6
Smarcc2Q6PDG5 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcc2Q6PDG5 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.79■□□□□ 0.6
Smarcc2Q6PDG5 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.79■□□□□ 0.6
Smarcc2Q6PDG5 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Smarcc2Q6PDG5 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcc2Q6PDG5 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcc2Q6PDG5 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcc2Q6PDG5 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcc2Q6PDG5 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcc2Q6PDG5 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcc2Q6PDG5 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Smarcc2Q6PDG5 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Smarcc2Q6PDG5 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcc2Q6PDG5 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.78■□□□□ 0.6
Smarcc2Q6PDG5 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcc2Q6PDG5 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.78■□□□□ 0.6
Smarcc2Q6PDG5 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
Smarcc2Q6PDG5 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcc2Q6PDG5 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcc2Q6PDG5 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcc2Q6PDG5 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcc2Q6PDG5 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcc2Q6PDG5 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcc2Q6PDG5 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcc2Q6PDG5 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcc2Q6PDG5 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcc2Q6PDG5 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms