Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Haglr-201ENSMUST00000100000 2085 ntBASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Gm11779-201ENSMUST00000118541 368 ntBASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Smchd1Q6P5D8 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smchd1Q6P5D8 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smchd1Q6P5D8 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smchd1Q6P5D8 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.64■□□□□ 0.41
Smchd1Q6P5D8 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smchd1Q6P5D8 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Smchd1Q6P5D8 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smchd1Q6P5D8 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smchd1Q6P5D8 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smchd1Q6P5D8 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smchd1Q6P5D8 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.64■□□□□ 0.41
Smchd1Q6P5D8 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smchd1Q6P5D8 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smchd1Q6P5D8 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Smchd1Q6P5D8 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smchd1Q6P5D8 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Smchd1Q6P5D8 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smchd1Q6P5D8 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.64■□□□□ 0.41
Smchd1Q6P5D8 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smchd1Q6P5D8 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smchd1Q6P5D8 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.64■□□□□ 0.41
Smchd1Q6P5D8 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smchd1Q6P5D8 Gm15590-201ENSMUST00000078419 552 ntBASIC17.64■□□□□ 0.41
Smchd1Q6P5D8 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Smchd1Q6P5D8 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smchd1Q6P5D8 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smchd1Q6P5D8 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smchd1Q6P5D8 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Smchd1Q6P5D8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smchd1Q6P5D8 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.63■□□□□ 0.41
Smchd1Q6P5D8 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Smchd1Q6P5D8 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smchd1Q6P5D8 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smchd1Q6P5D8 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smchd1Q6P5D8 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.63■□□□□ 0.41
Smchd1Q6P5D8 Gm8655-201ENSMUST00000221159 852 ntBASIC17.63■□□□□ 0.41
Smchd1Q6P5D8 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.63■□□□□ 0.41
Smchd1Q6P5D8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smchd1Q6P5D8 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Smchd1Q6P5D8 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smchd1Q6P5D8 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smchd1Q6P5D8 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smchd1Q6P5D8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smchd1Q6P5D8 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.62■□□□□ 0.41
Smchd1Q6P5D8 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.62■□□□□ 0.41
Smchd1Q6P5D8 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smchd1Q6P5D8 Gm6257-201ENSMUST00000163864 910 ntBASIC17.62■□□□□ 0.41
Smchd1Q6P5D8 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.62■□□□□ 0.41
Smchd1Q6P5D8 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.62■□□□□ 0.41
Smchd1Q6P5D8 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smchd1Q6P5D8 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.62■□□□□ 0.41
Smchd1Q6P5D8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Smchd1Q6P5D8 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smchd1Q6P5D8 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.62■□□□□ 0.41
Smchd1Q6P5D8 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Smchd1Q6P5D8 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.62■□□□□ 0.41
Smchd1Q6P5D8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smchd1Q6P5D8 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
Smchd1Q6P5D8 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smchd1Q6P5D8 Psmb5-202ENSMUST00000227257 622 ntBASIC17.62■□□□□ 0.41
Smchd1Q6P5D8 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smchd1Q6P5D8 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smchd1Q6P5D8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smchd1Q6P5D8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smchd1Q6P5D8 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smchd1Q6P5D8 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smchd1Q6P5D8 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smchd1Q6P5D8 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smchd1Q6P5D8 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.61■□□□□ 0.41
Smchd1Q6P5D8 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Smchd1Q6P5D8 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.61■□□□□ 0.41
Smchd1Q6P5D8 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.61■□□□□ 0.41
Smchd1Q6P5D8 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.61■□□□□ 0.41
Smchd1Q6P5D8 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smchd1Q6P5D8 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smchd1Q6P5D8 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smchd1Q6P5D8 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smchd1Q6P5D8 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smchd1Q6P5D8 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smchd1Q6P5D8 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms