Protein–RNA interactions for Protein: Q6A026

Pds5a, Sister chromatid cohesion protein PDS5 homolog A, mousemouse

Predictions only

Length 1,332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5aQ6A026 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pds5aQ6A026 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pds5aQ6A026 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pds5aQ6A026 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pds5aQ6A026 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.33■□□□□ 0.36
Pds5aQ6A026 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.33■□□□□ 0.36
Pds5aQ6A026 Gm25406-201ENSMUST00000157599 105 ntBASIC17.33■□□□□ 0.36
Pds5aQ6A026 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.33■□□□□ 0.36
Pds5aQ6A026 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Pds5aQ6A026 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.33■□□□□ 0.36
Pds5aQ6A026 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pds5aQ6A026 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pds5aQ6A026 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pds5aQ6A026 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pds5aQ6A026 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pds5aQ6A026 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Pds5aQ6A026 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pds5aQ6A026 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pds5aQ6A026 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pds5aQ6A026 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pds5aQ6A026 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pds5aQ6A026 Dancr-204ENSMUST00000132389 2347 ntBASIC17.32■□□□□ 0.36
Pds5aQ6A026 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pds5aQ6A026 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pds5aQ6A026 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pds5aQ6A026 Gm12644-201ENSMUST00000119935 606 ntBASIC17.32■□□□□ 0.36
Pds5aQ6A026 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Pds5aQ6A026 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.32■□□□□ 0.36
Pds5aQ6A026 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Pds5aQ6A026 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.32■□□□□ 0.36
Pds5aQ6A026 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.32■□□□□ 0.36
Pds5aQ6A026 Birc2-201ENSMUST00000054878 378 ntBASIC17.32■□□□□ 0.36
Pds5aQ6A026 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pds5aQ6A026 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pds5aQ6A026 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pds5aQ6A026 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pds5aQ6A026 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pds5aQ6A026 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pds5aQ6A026 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pds5aQ6A026 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pds5aQ6A026 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Pds5aQ6A026 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.32■□□□□ 0.36
Pds5aQ6A026 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.32■□□□□ 0.36
Pds5aQ6A026 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pds5aQ6A026 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pds5aQ6A026 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Pds5aQ6A026 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pds5aQ6A026 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pds5aQ6A026 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pds5aQ6A026 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pds5aQ6A026 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pds5aQ6A026 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pds5aQ6A026 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Pds5aQ6A026 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pds5aQ6A026 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.31■□□□□ 0.36
Pds5aQ6A026 Gm7153-201ENSMUST00000117092 455 ntBASIC17.31■□□□□ 0.36
Pds5aQ6A026 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pds5aQ6A026 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.31■□□□□ 0.36
Pds5aQ6A026 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pds5aQ6A026 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pds5aQ6A026 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pds5aQ6A026 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pds5aQ6A026 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pds5aQ6A026 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pds5aQ6A026 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pds5aQ6A026 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pds5aQ6A026 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pds5aQ6A026 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Pds5aQ6A026 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pds5aQ6A026 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pds5aQ6A026 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pds5aQ6A026 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Pds5aQ6A026 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pds5aQ6A026 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.3■□□□□ 0.36
Pds5aQ6A026 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.3■□□□□ 0.36
Pds5aQ6A026 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pds5aQ6A026 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.3■□□□□ 0.36
Pds5aQ6A026 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pds5aQ6A026 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pds5aQ6A026 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pds5aQ6A026 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pds5aQ6A026 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pds5aQ6A026 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pds5aQ6A026 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pds5aQ6A026 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pds5aQ6A026 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.3■□□□□ 0.36
Pds5aQ6A026 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pds5aQ6A026 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pds5aQ6A026 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pds5aQ6A026 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pds5aQ6A026 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pds5aQ6A026 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.29■□□□□ 0.36
Pds5aQ6A026 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pds5aQ6A026 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pds5aQ6A026 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pds5aQ6A026 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pds5aQ6A026 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pds5aQ6A026 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pds5aQ6A026 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pds5aQ6A026 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms