Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Scube3Q66PY1 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scube3Q66PY1 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scube3Q66PY1 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Scube3Q66PY1 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Scube3Q66PY1 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scube3Q66PY1 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Scube3Q66PY1 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.91■□□□□ 0.3
Scube3Q66PY1 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.91■□□□□ 0.3
Scube3Q66PY1 Gm17971-201ENSMUST00000190239 806 ntBASIC16.91■□□□□ 0.3
Scube3Q66PY1 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Scube3Q66PY1 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.91■□□□□ 0.3
Scube3Q66PY1 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scube3Q66PY1 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scube3Q66PY1 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scube3Q66PY1 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scube3Q66PY1 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Scube3Q66PY1 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Scube3Q66PY1 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scube3Q66PY1 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scube3Q66PY1 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scube3Q66PY1 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.9■□□□□ 0.3
Scube3Q66PY1 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.9■□□□□ 0.3
Scube3Q66PY1 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Scube3Q66PY1 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.9■□□□□ 0.3
Scube3Q66PY1 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Scube3Q66PY1 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scube3Q66PY1 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Scube3Q66PY1 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Scube3Q66PY1 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scube3Q66PY1 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.9■□□□□ 0.3
Scube3Q66PY1 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scube3Q66PY1 Gm27867-201ENSMUST00000184778 125 ntBASIC16.9■□□□□ 0.3
Scube3Q66PY1 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scube3Q66PY1 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.9■□□□□ 0.3
Scube3Q66PY1 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.9■□□□□ 0.3
Scube3Q66PY1 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scube3Q66PY1 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scube3Q66PY1 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scube3Q66PY1 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scube3Q66PY1 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Scube3Q66PY1 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Scube3Q66PY1 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scube3Q66PY1 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scube3Q66PY1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scube3Q66PY1 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scube3Q66PY1 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Scube3Q66PY1 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.3
Scube3Q66PY1 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Scube3Q66PY1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Scube3Q66PY1 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.89■□□□□ 0.29
Scube3Q66PY1 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scube3Q66PY1 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.89■□□□□ 0.29
Scube3Q66PY1 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scube3Q66PY1 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.89■□□□□ 0.29
Scube3Q66PY1 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Scube3Q66PY1 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.89■□□□□ 0.29
Scube3Q66PY1 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scube3Q66PY1 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
Scube3Q66PY1 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Scube3Q66PY1 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scube3Q66PY1 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scube3Q66PY1 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scube3Q66PY1 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scube3Q66PY1 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scube3Q66PY1 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scube3Q66PY1 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Scube3Q66PY1 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scube3Q66PY1 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.89■□□□□ 0.29
Scube3Q66PY1 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scube3Q66PY1 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scube3Q66PY1 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scube3Q66PY1 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scube3Q66PY1 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scube3Q66PY1 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scube3Q66PY1 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Scube3Q66PY1 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scube3Q66PY1 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Scube3Q66PY1 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scube3Q66PY1 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scube3Q66PY1 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scube3Q66PY1 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scube3Q66PY1 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.88■□□□□ 0.29
Scube3Q66PY1 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scube3Q66PY1 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scube3Q66PY1 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Scube3Q66PY1 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scube3Q66PY1 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.88■□□□□ 0.29
Scube3Q66PY1 Gm15165-201ENSMUST00000118140 502 ntBASIC16.88■□□□□ 0.29
Scube3Q66PY1 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.88■□□□□ 0.29
Scube3Q66PY1 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.88■□□□□ 0.29
Scube3Q66PY1 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Scube3Q66PY1 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scube3Q66PY1 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scube3Q66PY1 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scube3Q66PY1 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Scube3Q66PY1 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scube3Q66PY1 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scube3Q66PY1 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Scube3Q66PY1 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms