Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VclQ64727 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VclQ64727 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VclQ64727 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
VclQ64727 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
VclQ64727 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VclQ64727 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
VclQ64727 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VclQ64727 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
VclQ64727 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VclQ64727 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VclQ64727 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
VclQ64727 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VclQ64727 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
VclQ64727 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VclQ64727 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
VclQ64727 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VclQ64727 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VclQ64727 Gm28033-201ENSMUST00000184224 96 ntBASIC15.84■□□□□ 0.13
VclQ64727 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VclQ64727 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VclQ64727 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VclQ64727 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VclQ64727 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
VclQ64727 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VclQ64727 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VclQ64727 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
VclQ64727 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
VclQ64727 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VclQ64727 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VclQ64727 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VclQ64727 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.84■□□□□ 0.13
VclQ64727 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
VclQ64727 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VclQ64727 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VclQ64727 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VclQ64727 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
VclQ64727 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
VclQ64727 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.83■□□□□ 0.13
VclQ64727 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
VclQ64727 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.83■□□□□ 0.12
VclQ64727 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.83■□□□□ 0.12
VclQ64727 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.83■□□□□ 0.12
VclQ64727 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.83■□□□□ 0.12
VclQ64727 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.83■□□□□ 0.12
VclQ64727 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.83■□□□□ 0.12
VclQ64727 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
VclQ64727 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VclQ64727 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
VclQ64727 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
VclQ64727 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VclQ64727 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VclQ64727 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.83■□□□□ 0.12
VclQ64727 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VclQ64727 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VclQ64727 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VclQ64727 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.83■□□□□ 0.12
VclQ64727 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VclQ64727 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VclQ64727 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VclQ64727 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VclQ64727 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VclQ64727 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VclQ64727 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VclQ64727 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VclQ64727 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VclQ64727 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VclQ64727 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.82■□□□□ 0.12
VclQ64727 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VclQ64727 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.82■□□□□ 0.12
VclQ64727 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VclQ64727 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
VclQ64727 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
VclQ64727 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
VclQ64727 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VclQ64727 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.82■□□□□ 0.12
VclQ64727 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VclQ64727 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VclQ64727 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
VclQ64727 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VclQ64727 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VclQ64727 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
VclQ64727 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
VclQ64727 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
VclQ64727 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
VclQ64727 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VclQ64727 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.81■□□□□ 0.12
VclQ64727 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VclQ64727 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.81■□□□□ 0.12
VclQ64727 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
VclQ64727 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.81■□□□□ 0.12
VclQ64727 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.81■□□□□ 0.12
VclQ64727 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.81■□□□□ 0.12
VclQ64727 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.81■□□□□ 0.12
VclQ64727 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VclQ64727 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VclQ64727 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VclQ64727 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
VclQ64727 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
VclQ64727 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms