Protein–RNA interactions for Protein: Q61909

Runx1t1, Protein CBFA2T1, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Runx1t1Q61909 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Runx1t1Q61909 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Runx1t1Q61909 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Runx1t1Q61909 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Runx1t1Q61909 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Runx1t1Q61909 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.45■□□□□ 0.06
Runx1t1Q61909 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.45■□□□□ 0.06
Runx1t1Q61909 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Runx1t1Q61909 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.44■□□□□ 0.06
Runx1t1Q61909 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Runx1t1Q61909 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Runx1t1Q61909 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Runx1t1Q61909 Phf7-203ENSMUST00000226565 1971 ntBASIC15.44■□□□□ 0.06
Runx1t1Q61909 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Runx1t1Q61909 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Runx1t1Q61909 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Runx1t1Q61909 Gm13186-201ENSMUST00000118031 316 ntBASIC15.44■□□□□ 0.06
Runx1t1Q61909 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Runx1t1Q61909 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.44■□□□□ 0.06
Runx1t1Q61909 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Runx1t1Q61909 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Runx1t1Q61909 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Runx1t1Q61909 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Runx1t1Q61909 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Runx1t1Q61909 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.44■□□□□ 0.06
Runx1t1Q61909 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Runx1t1Q61909 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Runx1t1Q61909 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.44■□□□□ 0.06
Runx1t1Q61909 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Runx1t1Q61909 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Runx1t1Q61909 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Runx1t1Q61909 Actl10-202ENSMUST00000226583 1501 ntBASIC15.43■□□□□ 0.06
Runx1t1Q61909 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Runx1t1Q61909 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Runx1t1Q61909 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Runx1t1Q61909 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Runx1t1Q61909 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.43■□□□□ 0.06
Runx1t1Q61909 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.43■□□□□ 0.06
Runx1t1Q61909 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Runx1t1Q61909 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.43■□□□□ 0.06
Runx1t1Q61909 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.43■□□□□ 0.06
Runx1t1Q61909 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.43■□□□□ 0.06
Runx1t1Q61909 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Runx1t1Q61909 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Runx1t1Q61909 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Runx1t1Q61909 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Runx1t1Q61909 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Runx1t1Q61909 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.43■□□□□ 0.06
Runx1t1Q61909 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.43■□□□□ 0.06
Runx1t1Q61909 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Runx1t1Q61909 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Runx1t1Q61909 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Runx1t1Q61909 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Runx1t1Q61909 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Runx1t1Q61909 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Runx1t1Q61909 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Runx1t1Q61909 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Runx1t1Q61909 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Runx1t1Q61909 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Runx1t1Q61909 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Runx1t1Q61909 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.43■□□□□ 0.06
Runx1t1Q61909 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Runx1t1Q61909 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Runx1t1Q61909 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Runx1t1Q61909 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Runx1t1Q61909 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Runx1t1Q61909 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
Runx1t1Q61909 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Runx1t1Q61909 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Runx1t1Q61909 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Runx1t1Q61909 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.42■□□□□ 0.06
Runx1t1Q61909 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.42■□□□□ 0.06
Runx1t1Q61909 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Runx1t1Q61909 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.42■□□□□ 0.06
Runx1t1Q61909 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Runx1t1Q61909 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.42■□□□□ 0.06
Runx1t1Q61909 Gm7213-201ENSMUST00000215977 950 ntBASIC15.42■□□□□ 0.06
Runx1t1Q61909 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Runx1t1Q61909 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Runx1t1Q61909 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Runx1t1Q61909 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Runx1t1Q61909 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.41■□□□□ 0.06
Runx1t1Q61909 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Runx1t1Q61909 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Runx1t1Q61909 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Runx1t1Q61909 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Runx1t1Q61909 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Runx1t1Q61909 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Runx1t1Q61909 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Runx1t1Q61909 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.41■□□□□ 0.06
Runx1t1Q61909 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Runx1t1Q61909 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Runx1t1Q61909 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.41■□□□□ 0.06
Runx1t1Q61909 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.41■□□□□ 0.06
Runx1t1Q61909 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Runx1t1Q61909 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.41■□□□□ 0.06
Runx1t1Q61909 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Runx1t1Q61909 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Runx1t1Q61909 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Runx1t1Q61909 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms