Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd1Q61466 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd1Q61466 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Smarcd1Q61466 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd1Q61466 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd1Q61466 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.78■□□□□ 0.28
Smarcd1Q61466 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcd1Q61466 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcd1Q61466 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.77■□□□□ 0.28
Smarcd1Q61466 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcd1Q61466 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcd1Q61466 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcd1Q61466 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcd1Q61466 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcd1Q61466 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcd1Q61466 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcd1Q61466 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcd1Q61466 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
Smarcd1Q61466 Gm7506-201ENSMUST00000207758 815 ntBASIC16.77■□□□□ 0.28
Smarcd1Q61466 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.77■□□□□ 0.28
Smarcd1Q61466 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcd1Q61466 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Smarcd1Q61466 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Smarcd1Q61466 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smarcd1Q61466 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smarcd1Q61466 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smarcd1Q61466 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smarcd1Q61466 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Smarcd1Q61466 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smarcd1Q61466 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcd1Q61466 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcd1Q61466 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcd1Q61466 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Smarcd1Q61466 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Smarcd1Q61466 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Smarcd1Q61466 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcd1Q61466 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.76■□□□□ 0.27
Smarcd1Q61466 Gm12497-201ENSMUST00000138778 237 ntBASIC16.76■□□□□ 0.27
Smarcd1Q61466 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcd1Q61466 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcd1Q61466 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcd1Q61466 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Smarcd1Q61466 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcd1Q61466 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcd1Q61466 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcd1Q61466 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd1Q61466 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd1Q61466 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd1Q61466 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd1Q61466 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd1Q61466 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Smarcd1Q61466 Gm7461-201ENSMUST00000058918 827 ntBASIC16.75■□□□□ 0.27
Smarcd1Q61466 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd1Q61466 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd1Q61466 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd1Q61466 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd1Q61466 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd1Q61466 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.75■□□□□ 0.27
Smarcd1Q61466 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd1Q61466 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd1Q61466 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd1Q61466 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Smarcd1Q61466 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd1Q61466 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd1Q61466 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd1Q61466 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd1Q61466 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd1Q61466 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd1Q61466 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd1Q61466 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd1Q61466 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd1Q61466 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd1Q61466 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Smarcd1Q61466 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.74■□□□□ 0.27
Smarcd1Q61466 Gm5864-201ENSMUST00000202263 970 ntBASIC16.74■□□□□ 0.27
Smarcd1Q61466 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.74■□□□□ 0.27
Smarcd1Q61466 Rps4l-201ENSMUST00000071745 943 ntBASIC16.74■□□□□ 0.27
Smarcd1Q61466 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Smarcd1Q61466 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd1Q61466 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd1Q61466 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.74■□□□□ 0.27
Smarcd1Q61466 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd1Q61466 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd1Q61466 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd1Q61466 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd1Q61466 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Smarcd1Q61466 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Smarcd1Q61466 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcd1Q61466 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcd1Q61466 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcd1Q61466 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
Smarcd1Q61466 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.73■□□□□ 0.27
Smarcd1Q61466 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.73■□□□□ 0.27
Smarcd1Q61466 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Smarcd1Q61466 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcd1Q61466 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Smarcd1Q61466 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcd1Q61466 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
Smarcd1Q61466 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Smarcd1Q61466 Gm13884-201ENSMUST00000118103 829 ntBASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms