Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccne1Q61457 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccne1Q61457 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccne1Q61457 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccne1Q61457 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Ccne1Q61457 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccne1Q61457 Gm11764-201ENSMUST00000120221 623 ntBASIC20.92■□□□□ 0.94
Ccne1Q61457 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
Ccne1Q61457 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccne1Q61457 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC20.92■□□□□ 0.94
Ccne1Q61457 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccne1Q61457 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Ccne1Q61457 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Ccne1Q61457 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Ccne1Q61457 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC20.92■□□□□ 0.94
Ccne1Q61457 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccne1Q61457 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ccne1Q61457 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccne1Q61457 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC20.91■□□□□ 0.94
Ccne1Q61457 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccne1Q61457 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccne1Q61457 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC20.91■□□□□ 0.94
Ccne1Q61457 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC20.91■□□□□ 0.94
Ccne1Q61457 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ccne1Q61457 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Ccne1Q61457 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC20.91■□□□□ 0.94
Ccne1Q61457 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ccne1Q61457 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC20.91■□□□□ 0.94
Ccne1Q61457 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccne1Q61457 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ccne1Q61457 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccne1Q61457 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccne1Q61457 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccne1Q61457 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Ccne1Q61457 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ccne1Q61457 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccne1Q61457 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccne1Q61457 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ccne1Q61457 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccne1Q61457 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccne1Q61457 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Ccne1Q61457 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccne1Q61457 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ccne1Q61457 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC20.9■□□□□ 0.94
Ccne1Q61457 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC20.9■□□□□ 0.94
Ccne1Q61457 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccne1Q61457 Gm2308-201ENSMUST00000166539 1004 ntBASIC20.9■□□□□ 0.94
Ccne1Q61457 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC20.9■□□□□ 0.94
Ccne1Q61457 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccne1Q61457 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC20.9■□□□□ 0.94
Ccne1Q61457 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccne1Q61457 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ccne1Q61457 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccne1Q61457 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.89■□□□□ 0.94
Ccne1Q61457 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ccne1Q61457 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.89■□□□□ 0.94
Ccne1Q61457 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC20.89■□□□□ 0.94
Ccne1Q61457 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ccne1Q61457 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ccne1Q61457 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ccne1Q61457 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccne1Q61457 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Ccne1Q61457 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC20.89■□□□□ 0.93
Ccne1Q61457 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Ccne1Q61457 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccne1Q61457 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC20.89■□□□□ 0.93
Ccne1Q61457 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccne1Q61457 Gm45167-201ENSMUST00000208007 322 ntBASIC20.89■□□□□ 0.93
Ccne1Q61457 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ccne1Q61457 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccne1Q61457 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccne1Q61457 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccne1Q61457 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccne1Q61457 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC20.89■□□□□ 0.93
Ccne1Q61457 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ccne1Q61457 Gm8839-201ENSMUST00000121279 1645 ntBASIC20.89■□□□□ 0.93
Ccne1Q61457 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ccne1Q61457 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Ccne1Q61457 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccne1Q61457 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.88■□□□□ 0.93
Ccne1Q61457 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccne1Q61457 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Ccne1Q61457 Gm11873-201ENSMUST00000117877 1304 ntBASIC20.88■□□□□ 0.93
Ccne1Q61457 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ccne1Q61457 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ccne1Q61457 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC20.88■□□□□ 0.93
Ccne1Q61457 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccne1Q61457 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccne1Q61457 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccne1Q61457 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccne1Q61457 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccne1Q61457 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccne1Q61457 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccne1Q61457 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccne1Q61457 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccne1Q61457 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccne1Q61457 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Ccne1Q61457 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
Ccne1Q61457 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC20.87■□□□□ 0.93
Ccne1Q61457 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms