Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ift88Q61371 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ift88Q61371 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ift88Q61371 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ift88Q61371 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ift88Q61371 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ift88Q61371 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ift88Q61371 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.88■□□□□ 0.45
Ift88Q61371 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ift88Q61371 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ift88Q61371 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Ift88Q61371 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Ift88Q61371 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Ift88Q61371 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ift88Q61371 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ift88Q61371 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ift88Q61371 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ift88Q61371 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.88■□□□□ 0.45
Ift88Q61371 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ift88Q61371 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Ift88Q61371 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ift88Q61371 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.88■□□□□ 0.45
Ift88Q61371 Gm7213-201ENSMUST00000215977 950 ntBASIC17.88■□□□□ 0.45
Ift88Q61371 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Ift88Q61371 Gm10566-201ENSMUST00000086739 996 ntBASIC17.88■□□□□ 0.45
Ift88Q61371 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ift88Q61371 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ift88Q61371 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ift88Q61371 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.88■□□□□ 0.45
Ift88Q61371 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ift88Q61371 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ift88Q61371 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ift88Q61371 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ift88Q61371 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ift88Q61371 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ift88Q61371 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Ift88Q61371 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ift88Q61371 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.88■□□□□ 0.45
Ift88Q61371 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Ift88Q61371 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ift88Q61371 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.87■□□□□ 0.45
Ift88Q61371 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ift88Q61371 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ift88Q61371 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ift88Q61371 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ift88Q61371 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ift88Q61371 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ift88Q61371 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ift88Q61371 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ift88Q61371 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Ift88Q61371 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ift88Q61371 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ift88Q61371 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ift88Q61371 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ift88Q61371 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ift88Q61371 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ift88Q61371 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ift88Q61371 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.86■□□□□ 0.45
Ift88Q61371 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.86■□□□□ 0.45
Ift88Q61371 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Ift88Q61371 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.86■□□□□ 0.45
Ift88Q61371 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ift88Q61371 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Ift88Q61371 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Ift88Q61371 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ift88Q61371 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.86■□□□□ 0.45
Ift88Q61371 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.86■□□□□ 0.45
Ift88Q61371 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ift88Q61371 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ift88Q61371 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ift88Q61371 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ift88Q61371 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
Ift88Q61371 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ift88Q61371 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Ift88Q61371 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ift88Q61371 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ift88Q61371 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ift88Q61371 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ift88Q61371 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.85■□□□□ 0.45
Ift88Q61371 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.85■□□□□ 0.45
Ift88Q61371 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.85■□□□□ 0.45
Ift88Q61371 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ift88Q61371 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ift88Q61371 Gm30025-201ENSMUST00000218555 728 ntBASIC17.85■□□□□ 0.45
Ift88Q61371 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.85■□□□□ 0.45
Ift88Q61371 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ift88Q61371 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ift88Q61371 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ift88Q61371 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ift88Q61371 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Ift88Q61371 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ift88Q61371 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ift88Q61371 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ift88Q61371 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ift88Q61371 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ift88Q61371 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ift88Q61371 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ift88Q61371 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Ift88Q61371 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ift88Q61371 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms