Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Col11a1Q61245 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.97■□□□□ 0.47
Col11a1Q61245 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col11a1Q61245 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col11a1Q61245 Gm7774-201ENSMUST00000200064 533 ntBASIC17.96■□□□□ 0.47
Col11a1Q61245 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC17.96■□□□□ 0.47
Col11a1Q61245 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col11a1Q61245 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col11a1Q61245 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col11a1Q61245 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col11a1Q61245 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.96■□□□□ 0.47
Col11a1Q61245 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col11a1Q61245 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col11a1Q61245 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col11a1Q61245 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col11a1Q61245 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col11a1Q61245 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.96■□□□□ 0.46
Col11a1Q61245 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.95■□□□□ 0.46
Col11a1Q61245 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col11a1Q61245 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col11a1Q61245 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.95■□□□□ 0.46
Col11a1Q61245 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.95■□□□□ 0.46
Col11a1Q61245 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.95■□□□□ 0.46
Col11a1Q61245 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col11a1Q61245 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col11a1Q61245 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Col11a1Q61245 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col11a1Q61245 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col11a1Q61245 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col11a1Q61245 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col11a1Q61245 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col11a1Q61245 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col11a1Q61245 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col11a1Q61245 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.95■□□□□ 0.46
Col11a1Q61245 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col11a1Q61245 Gm16198-201ENSMUST00000118766 670 ntBASIC17.95■□□□□ 0.46
Col11a1Q61245 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.95■□□□□ 0.46
Col11a1Q61245 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC17.95■□□□□ 0.46
Col11a1Q61245 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col11a1Q61245 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Col11a1Q61245 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col11a1Q61245 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Col11a1Q61245 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Col11a1Q61245 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Col11a1Q61245 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col11a1Q61245 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Col11a1Q61245 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col11a1Q61245 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col11a1Q61245 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.94■□□□□ 0.46
Col11a1Q61245 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Col11a1Q61245 Gm22175-201ENSMUST00000175007 78 ntBASIC17.94■□□□□ 0.46
Col11a1Q61245 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Col11a1Q61245 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Col11a1Q61245 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.94■□□□□ 0.46
Col11a1Q61245 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col11a1Q61245 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col11a1Q61245 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.94■□□□□ 0.46
Col11a1Q61245 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col11a1Q61245 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col11a1Q61245 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Col11a1Q61245 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Col11a1Q61245 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Col11a1Q61245 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.94■□□□□ 0.46
Col11a1Q61245 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Col11a1Q61245 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col11a1Q61245 Gm13223-201ENSMUST00000118609 747 ntBASIC17.93■□□□□ 0.46
Col11a1Q61245 Gm38294-201ENSMUST00000192831 381 ntBASIC17.93■□□□□ 0.46
Col11a1Q61245 Gm10253-201ENSMUST00000194270 940 ntBASIC17.93■□□□□ 0.46
Col11a1Q61245 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.93■□□□□ 0.46
Col11a1Q61245 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.93■□□□□ 0.46
Col11a1Q61245 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col11a1Q61245 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Col11a1Q61245 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Col11a1Q61245 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col11a1Q61245 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col11a1Q61245 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.93■□□□□ 0.46
Col11a1Q61245 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Col11a1Q61245 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col11a1Q61245 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col11a1Q61245 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col11a1Q61245 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC17.93■□□□□ 0.46
Col11a1Q61245 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Col11a1Q61245 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.93■□□□□ 0.46
Col11a1Q61245 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.93■□□□□ 0.46
Col11a1Q61245 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col11a1Q61245 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Col11a1Q61245 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
Col11a1Q61245 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col11a1Q61245 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.92■□□□□ 0.46
Col11a1Q61245 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.92■□□□□ 0.46
Col11a1Q61245 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col11a1Q61245 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.92■□□□□ 0.46
Col11a1Q61245 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col11a1Q61245 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Col11a1Q61245 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col11a1Q61245 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.92■□□□□ 0.46
Col11a1Q61245 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.92■□□□□ 0.46
Col11a1Q61245 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col11a1Q61245 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.92■□□□□ 0.46
Col11a1Q61245 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms