Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slc6a4Q60857 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Slc6a4Q60857 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slc6a4Q60857 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.47■□□□□ 0.23
Slc6a4Q60857 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slc6a4Q60857 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Slc6a4Q60857 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slc6a4Q60857 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
Slc6a4Q60857 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.47■□□□□ 0.23
Slc6a4Q60857 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.47■□□□□ 0.23
Slc6a4Q60857 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.47■□□□□ 0.23
Slc6a4Q60857 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Slc6a4Q60857 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.47■□□□□ 0.23
Slc6a4Q60857 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.47■□□□□ 0.23
Slc6a4Q60857 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slc6a4Q60857 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slc6a4Q60857 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.47■□□□□ 0.23
Slc6a4Q60857 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Slc6a4Q60857 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc6a4Q60857 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc6a4Q60857 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc6a4Q60857 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc6a4Q60857 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc6a4Q60857 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc6a4Q60857 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc6a4Q60857 Gm8097-201ENSMUST00000117903 829 ntBASIC16.46■□□□□ 0.23
Slc6a4Q60857 Gm12497-201ENSMUST00000138778 237 ntBASIC16.46■□□□□ 0.23
Slc6a4Q60857 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Slc6a4Q60857 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.46■□□□□ 0.23
Slc6a4Q60857 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Slc6a4Q60857 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.46■□□□□ 0.23
Slc6a4Q60857 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Slc6a4Q60857 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Slc6a4Q60857 Gm9172-201ENSMUST00000212092 954 ntBASIC16.46■□□□□ 0.23
Slc6a4Q60857 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc6a4Q60857 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.46■□□□□ 0.23
Slc6a4Q60857 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Slc6a4Q60857 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc6a4Q60857 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Slc6a4Q60857 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc6a4Q60857 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc6a4Q60857 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Slc6a4Q60857 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Slc6a4Q60857 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Slc6a4Q60857 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a4Q60857 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a4Q60857 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a4Q60857 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Slc6a4Q60857 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a4Q60857 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a4Q60857 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a4Q60857 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a4Q60857 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a4Q60857 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a4Q60857 Gm13418-201ENSMUST00000119097 944 ntBASIC16.45■□□□□ 0.22
Slc6a4Q60857 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.45■□□□□ 0.22
Slc6a4Q60857 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.45■□□□□ 0.22
Slc6a4Q60857 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.45■□□□□ 0.22
Slc6a4Q60857 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a4Q60857 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a4Q60857 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a4Q60857 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a4Q60857 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a4Q60857 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a4Q60857 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
Slc6a4Q60857 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Slc6a4Q60857 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a4Q60857 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Slc6a4Q60857 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.45■□□□□ 0.22
Slc6a4Q60857 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a4Q60857 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a4Q60857 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a4Q60857 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a4Q60857 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a4Q60857 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a4Q60857 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a4Q60857 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a4Q60857 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a4Q60857 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Slc6a4Q60857 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a4Q60857 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a4Q60857 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a4Q60857 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a4Q60857 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.44■□□□□ 0.22
Slc6a4Q60857 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.44■□□□□ 0.22
Slc6a4Q60857 Gm4535-201ENSMUST00000182274 558 ntBASIC16.44■□□□□ 0.22
Slc6a4Q60857 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Slc6a4Q60857 Gm18195-201ENSMUST00000207604 706 ntBASIC16.44■□□□□ 0.22
Slc6a4Q60857 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.44■□□□□ 0.22
Slc6a4Q60857 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a4Q60857 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a4Q60857 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a4Q60857 Gm10355-201ENSMUST00000097146 517 ntBASIC16.44■□□□□ 0.22
Slc6a4Q60857 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a4Q60857 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.44■□□□□ 0.22
Slc6a4Q60857 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a4Q60857 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a4Q60857 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a4Q60857 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a4Q60857 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms