Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.85■□□□□ 0.13
Col12a1Q60847 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.85■□□□□ 0.13
Col12a1Q60847 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col12a1Q60847 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col12a1Q60847 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.84■□□□□ 0.13
Col12a1Q60847 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col12a1Q60847 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col12a1Q60847 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Col12a1Q60847 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col12a1Q60847 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col12a1Q60847 Rpph1-201ENSMUST00000175096 319 ntBASIC15.84■□□□□ 0.13
Col12a1Q60847 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col12a1Q60847 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col12a1Q60847 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.84■□□□□ 0.13
Col12a1Q60847 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col12a1Q60847 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
Col12a1Q60847 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col12a1Q60847 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col12a1Q60847 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col12a1Q60847 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.83■□□□□ 0.13
Col12a1Q60847 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.83■□□□□ 0.13
Col12a1Q60847 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col12a1Q60847 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Col12a1Q60847 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Col12a1Q60847 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col12a1Q60847 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
Col12a1Q60847 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col12a1Q60847 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Col12a1Q60847 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col12a1Q60847 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Col12a1Q60847 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Col12a1Q60847 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col12a1Q60847 Gm10253-201ENSMUST00000194270 940 ntBASIC15.83■□□□□ 0.12
Col12a1Q60847 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.83■□□□□ 0.12
Col12a1Q60847 Gm18622-201ENSMUST00000219361 595 ntBASIC15.83■□□□□ 0.12
Col12a1Q60847 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col12a1Q60847 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col12a1Q60847 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.83■□□□□ 0.12
Col12a1Q60847 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col12a1Q60847 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col12a1Q60847 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col12a1Q60847 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col12a1Q60847 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Col12a1Q60847 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Col12a1Q60847 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.83■□□□□ 0.12
Col12a1Q60847 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.83■□□□□ 0.12
Col12a1Q60847 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.83■□□□□ 0.12
Col12a1Q60847 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col12a1Q60847 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Col12a1Q60847 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col12a1Q60847 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.83■□□□□ 0.12
Col12a1Q60847 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col12a1Q60847 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col12a1Q60847 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col12a1Q60847 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.82■□□□□ 0.12
Col12a1Q60847 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col12a1Q60847 Gm27618-201ENSMUST00000183671 60 ntBASIC15.82■□□□□ 0.12
Col12a1Q60847 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col12a1Q60847 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col12a1Q60847 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col12a1Q60847 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col12a1Q60847 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col12a1Q60847 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Col12a1Q60847 Gm25287-201ENSMUST00000103846 110 ntBASIC15.82■□□□□ 0.12
Col12a1Q60847 Gm22918-201ENSMUST00000103855 110 ntBASIC15.82■□□□□ 0.12
Col12a1Q60847 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.82■□□□□ 0.12
Col12a1Q60847 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC15.82■□□□□ 0.12
Col12a1Q60847 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Col12a1Q60847 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col12a1Q60847 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col12a1Q60847 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col12a1Q60847 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col12a1Q60847 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col12a1Q60847 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.81■□□□□ 0.12
Col12a1Q60847 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.81■□□□□ 0.12
Col12a1Q60847 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.81■□□□□ 0.12
Col12a1Q60847 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col12a1Q60847 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col12a1Q60847 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col12a1Q60847 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col12a1Q60847 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Col12a1Q60847 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC15.81■□□□□ 0.12
Col12a1Q60847 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Col12a1Q60847 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col12a1Q60847 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Col12a1Q60847 Gm15487-201ENSMUST00000122373 465 ntBASIC15.81■□□□□ 0.12
Col12a1Q60847 Gm43630-201ENSMUST00000201550 776 ntBASIC15.81■□□□□ 0.12
Col12a1Q60847 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col12a1Q60847 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.81■□□□□ 0.12
Col12a1Q60847 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col12a1Q60847 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col12a1Q60847 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC15.81■□□□□ 0.12
Col12a1Q60847 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col12a1Q60847 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.8■□□□□ 0.12
Col12a1Q60847 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col12a1Q60847 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col12a1Q60847 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col12a1Q60847 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col12a1Q60847 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col12a1Q60847 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms