Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Prdm1Q60636 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Prdm1Q60636 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prdm1Q60636 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prdm1Q60636 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Prdm1Q60636 Gm27867-201ENSMUST00000184778 125 ntBASIC18.83■□□□□ 0.6
Prdm1Q60636 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Prdm1Q60636 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prdm1Q60636 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prdm1Q60636 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prdm1Q60636 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Prdm1Q60636 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Prdm1Q60636 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Prdm1Q60636 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prdm1Q60636 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prdm1Q60636 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prdm1Q60636 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Prdm1Q60636 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prdm1Q60636 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Prdm1Q60636 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prdm1Q60636 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Prdm1Q60636 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Prdm1Q60636 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prdm1Q60636 Gm12895-201ENSMUST00000122214 226 ntBASIC18.82■□□□□ 0.6
Prdm1Q60636 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Prdm1Q60636 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.82■□□□□ 0.6
Prdm1Q60636 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.82■□□□□ 0.6
Prdm1Q60636 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.82■□□□□ 0.6
Prdm1Q60636 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prdm1Q60636 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.82■□□□□ 0.6
Prdm1Q60636 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Prdm1Q60636 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prdm1Q60636 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prdm1Q60636 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prdm1Q60636 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prdm1Q60636 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Prdm1Q60636 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Prdm1Q60636 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.82■□□□□ 0.6
Prdm1Q60636 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prdm1Q60636 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Prdm1Q60636 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Prdm1Q60636 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Prdm1Q60636 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prdm1Q60636 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Prdm1Q60636 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Prdm1Q60636 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prdm1Q60636 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.81■□□□□ 0.6
Prdm1Q60636 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Prdm1Q60636 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Prdm1Q60636 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Prdm1Q60636 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prdm1Q60636 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prdm1Q60636 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.81■□□□□ 0.6
Prdm1Q60636 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.81■□□□□ 0.6
Prdm1Q60636 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Prdm1Q60636 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prdm1Q60636 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Prdm1Q60636 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prdm1Q60636 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Prdm1Q60636 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.8■□□□□ 0.6
Prdm1Q60636 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.8■□□□□ 0.6
Prdm1Q60636 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prdm1Q60636 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prdm1Q60636 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prdm1Q60636 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Prdm1Q60636 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prdm1Q60636 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prdm1Q60636 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prdm1Q60636 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Prdm1Q60636 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prdm1Q60636 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prdm1Q60636 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prdm1Q60636 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prdm1Q60636 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prdm1Q60636 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.8■□□□□ 0.6
Prdm1Q60636 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prdm1Q60636 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prdm1Q60636 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prdm1Q60636 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prdm1Q60636 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prdm1Q60636 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prdm1Q60636 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prdm1Q60636 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.79■□□□□ 0.6
Prdm1Q60636 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.79■□□□□ 0.6
Prdm1Q60636 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.79■□□□□ 0.6
Prdm1Q60636 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prdm1Q60636 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prdm1Q60636 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prdm1Q60636 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prdm1Q60636 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Prdm1Q60636 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prdm1Q60636 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prdm1Q60636 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Prdm1Q60636 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Prdm1Q60636 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Prdm1Q60636 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prdm1Q60636 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.79■□□□□ 0.6
Prdm1Q60636 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prdm1Q60636 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prdm1Q60636 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms