Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shroom1Q5SX79 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shroom1Q5SX79 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shroom1Q5SX79 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shroom1Q5SX79 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Shroom1Q5SX79 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.13■□□□□ 0.33
Shroom1Q5SX79 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.13■□□□□ 0.33
Shroom1Q5SX79 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shroom1Q5SX79 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shroom1Q5SX79 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shroom1Q5SX79 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shroom1Q5SX79 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shroom1Q5SX79 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shroom1Q5SX79 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shroom1Q5SX79 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shroom1Q5SX79 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shroom1Q5SX79 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Shroom1Q5SX79 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Shroom1Q5SX79 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Shroom1Q5SX79 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Shroom1Q5SX79 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shroom1Q5SX79 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.12■□□□□ 0.33
Shroom1Q5SX79 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shroom1Q5SX79 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shroom1Q5SX79 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shroom1Q5SX79 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shroom1Q5SX79 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Shroom1Q5SX79 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shroom1Q5SX79 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Shroom1Q5SX79 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Shroom1Q5SX79 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Shroom1Q5SX79 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shroom1Q5SX79 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shroom1Q5SX79 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.11■□□□□ 0.33
Shroom1Q5SX79 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shroom1Q5SX79 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shroom1Q5SX79 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Shroom1Q5SX79 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Shroom1Q5SX79 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shroom1Q5SX79 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shroom1Q5SX79 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shroom1Q5SX79 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Shroom1Q5SX79 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shroom1Q5SX79 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Shroom1Q5SX79 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.11■□□□□ 0.33
Shroom1Q5SX79 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.11■□□□□ 0.33
Shroom1Q5SX79 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.11■□□□□ 0.33
Shroom1Q5SX79 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shroom1Q5SX79 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Shroom1Q5SX79 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shroom1Q5SX79 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shroom1Q5SX79 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shroom1Q5SX79 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Shroom1Q5SX79 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shroom1Q5SX79 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shroom1Q5SX79 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Shroom1Q5SX79 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shroom1Q5SX79 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Shroom1Q5SX79 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Shroom1Q5SX79 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
Shroom1Q5SX79 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.11■□□□□ 0.33
Shroom1Q5SX79 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shroom1Q5SX79 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shroom1Q5SX79 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shroom1Q5SX79 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shroom1Q5SX79 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shroom1Q5SX79 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Shroom1Q5SX79 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Shroom1Q5SX79 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shroom1Q5SX79 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Shroom1Q5SX79 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shroom1Q5SX79 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Shroom1Q5SX79 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.1■□□□□ 0.33
Shroom1Q5SX79 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.1■□□□□ 0.33
Shroom1Q5SX79 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.1■□□□□ 0.33
Shroom1Q5SX79 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.1■□□□□ 0.33
Shroom1Q5SX79 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Shroom1Q5SX79 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shroom1Q5SX79 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shroom1Q5SX79 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shroom1Q5SX79 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shroom1Q5SX79 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shroom1Q5SX79 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shroom1Q5SX79 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Shroom1Q5SX79 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shroom1Q5SX79 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shroom1Q5SX79 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shroom1Q5SX79 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shroom1Q5SX79 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Shroom1Q5SX79 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shroom1Q5SX79 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Shroom1Q5SX79 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.09■□□□□ 0.33
Shroom1Q5SX79 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.09■□□□□ 0.33
Shroom1Q5SX79 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.09■□□□□ 0.33
Shroom1Q5SX79 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shroom1Q5SX79 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shroom1Q5SX79 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.09■□□□□ 0.33
Shroom1Q5SX79 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shroom1Q5SX79 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shroom1Q5SX79 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms