Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps54Q5SPW0 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps54Q5SPW0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Vps54Q5SPW0 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC19.34■□□□□ 0.69
Vps54Q5SPW0 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC19.34■□□□□ 0.69
Vps54Q5SPW0 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps54Q5SPW0 Mir6404-201ENSMUST00000183699 94 ntBASIC19.34■□□□□ 0.69
Vps54Q5SPW0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps54Q5SPW0 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps54Q5SPW0 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps54Q5SPW0 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vps54Q5SPW0 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Vps54Q5SPW0 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vps54Q5SPW0 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps54Q5SPW0 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vps54Q5SPW0 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vps54Q5SPW0 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19.33■□□□□ 0.69
Vps54Q5SPW0 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19.33■□□□□ 0.69
Vps54Q5SPW0 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vps54Q5SPW0 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vps54Q5SPW0 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vps54Q5SPW0 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vps54Q5SPW0 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vps54Q5SPW0 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vps54Q5SPW0 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Vps54Q5SPW0 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps54Q5SPW0 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps54Q5SPW0 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Vps54Q5SPW0 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps54Q5SPW0 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps54Q5SPW0 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Vps54Q5SPW0 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps54Q5SPW0 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Vps54Q5SPW0 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps54Q5SPW0 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps54Q5SPW0 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.68
Vps54Q5SPW0 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps54Q5SPW0 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps54Q5SPW0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Vps54Q5SPW0 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Vps54Q5SPW0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Vps54Q5SPW0 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Vps54Q5SPW0 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.32■□□□□ 0.68
Vps54Q5SPW0 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps54Q5SPW0 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Vps54Q5SPW0 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.32■□□□□ 0.68
Vps54Q5SPW0 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Vps54Q5SPW0 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Vps54Q5SPW0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps54Q5SPW0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps54Q5SPW0 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps54Q5SPW0 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps54Q5SPW0 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Vps54Q5SPW0 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps54Q5SPW0 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps54Q5SPW0 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps54Q5SPW0 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Vps54Q5SPW0 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC19.31■□□□□ 0.68
Vps54Q5SPW0 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps54Q5SPW0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Vps54Q5SPW0 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Vps54Q5SPW0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC19.31■□□□□ 0.68
Vps54Q5SPW0 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps54Q5SPW0 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Vps54Q5SPW0 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps54Q5SPW0 Gm25406-201ENSMUST00000157599 105 ntBASIC19.31■□□□□ 0.68
Vps54Q5SPW0 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Vps54Q5SPW0 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC19.31■□□□□ 0.68
Vps54Q5SPW0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Vps54Q5SPW0 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps54Q5SPW0 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Vps54Q5SPW0 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Vps54Q5SPW0 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Vps54Q5SPW0 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Vps54Q5SPW0 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps54Q5SPW0 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Vps54Q5SPW0 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps54Q5SPW0 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps54Q5SPW0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps54Q5SPW0 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps54Q5SPW0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps54Q5SPW0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps54Q5SPW0 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Vps54Q5SPW0 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps54Q5SPW0 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Vps54Q5SPW0 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Vps54Q5SPW0 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps54Q5SPW0 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps54Q5SPW0 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps54Q5SPW0 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps54Q5SPW0 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps54Q5SPW0 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps54Q5SPW0 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps54Q5SPW0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps54Q5SPW0 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps54Q5SPW0 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps54Q5SPW0 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps54Q5SPW0 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Vps54Q5SPW0 Wnt10b-206ENSMUST00000228546 2709 ntBASIC19.3■□□□□ 0.68
Vps54Q5SPW0 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms