Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav2Q5R1I9 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav2Q5R1I9 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.87□□□□□ -0.35
Trav2Q5R1I9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav2Q5R1I9 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav2Q5R1I9 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav2Q5R1I9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav2Q5R1I9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav2Q5R1I9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav2Q5R1I9 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav2Q5R1I9 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.87□□□□□ -0.35
Trav2Q5R1I9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav2Q5R1I9 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav2Q5R1I9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav2Q5R1I9 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.86□□□□□ -0.35
Trav2Q5R1I9 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav2Q5R1I9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav2Q5R1I9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav2Q5R1I9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav2Q5R1I9 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav2Q5R1I9 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav2Q5R1I9 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.86□□□□□ -0.35
Trav2Q5R1I9 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav2Q5R1I9 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav2Q5R1I9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav2Q5R1I9 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav2Q5R1I9 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Trav2Q5R1I9 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav2Q5R1I9 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.86□□□□□ -0.35
Trav2Q5R1I9 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.86□□□□□ -0.35
Trav2Q5R1I9 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.86□□□□□ -0.35
Trav2Q5R1I9 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav2Q5R1I9 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav2Q5R1I9 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav2Q5R1I9 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav2Q5R1I9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav2Q5R1I9 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav2Q5R1I9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav2Q5R1I9 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav2Q5R1I9 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav2Q5R1I9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav2Q5R1I9 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Trav2Q5R1I9 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav2Q5R1I9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav2Q5R1I9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav2Q5R1I9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav2Q5R1I9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav2Q5R1I9 Gm28265-201ENSMUST00000188201 2319 ntBASIC12.85□□□□□ -0.35
Trav2Q5R1I9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav2Q5R1I9 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav2Q5R1I9 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav2Q5R1I9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav2Q5R1I9 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav2Q5R1I9 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav2Q5R1I9 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav2Q5R1I9 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav2Q5R1I9 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav2Q5R1I9 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Trav2Q5R1I9 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav2Q5R1I9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav2Q5R1I9 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav2Q5R1I9 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav2Q5R1I9 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav2Q5R1I9 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.85□□□□□ -0.35
Trav2Q5R1I9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav2Q5R1I9 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trav2Q5R1I9 Gm27867-201ENSMUST00000184778 125 ntBASIC12.85□□□□□ -0.35
Trav2Q5R1I9 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.85□□□□□ -0.35
Trav2Q5R1I9 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.85□□□□□ -0.35
Trav2Q5R1I9 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav2Q5R1I9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav2Q5R1I9 Gm43338-201ENSMUST00000198617 2223 ntBASIC12.85□□□□□ -0.35
Trav2Q5R1I9 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav2Q5R1I9 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav2Q5R1I9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav2Q5R1I9 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav2Q5R1I9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav2Q5R1I9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav2Q5R1I9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav2Q5R1I9 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav2Q5R1I9 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav2Q5R1I9 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav2Q5R1I9 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav2Q5R1I9 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.84□□□□□ -0.35
Trav2Q5R1I9 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav2Q5R1I9 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.84□□□□□ -0.35
Trav2Q5R1I9 Gm5864-201ENSMUST00000202263 970 ntBASIC12.84□□□□□ -0.35
Trav2Q5R1I9 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.84□□□□□ -0.35
Trav2Q5R1I9 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.84□□□□□ -0.35
Trav2Q5R1I9 Mzt1-203ENSMUST00000227948 952 ntBASIC12.84□□□□□ -0.35
Trav2Q5R1I9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav2Q5R1I9 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav2Q5R1I9 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav2Q5R1I9 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.84□□□□□ -0.35
Trav2Q5R1I9 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav2Q5R1I9 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav2Q5R1I9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav2Q5R1I9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav2Q5R1I9 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav2Q5R1I9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms