Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-2Q5R1I4 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.14□□□□□ -0.15
Trav6-2Q5R1I4 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.14□□□□□ -0.15
Trav6-2Q5R1I4 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-2Q5R1I4 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-2Q5R1I4 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-2Q5R1I4 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-2Q5R1I4 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-2Q5R1I4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-2Q5R1I4 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-2Q5R1I4 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-2Q5R1I4 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
Trav6-2Q5R1I4 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-2Q5R1I4 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-2Q5R1I4 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-2Q5R1I4 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-2Q5R1I4 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav6-2Q5R1I4 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-2Q5R1I4 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-2Q5R1I4 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-2Q5R1I4 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-2Q5R1I4 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-2Q5R1I4 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-2Q5R1I4 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-2Q5R1I4 Gm13036-201ENSMUST00000117799 748 ntBASIC14.13□□□□□ -0.15
Trav6-2Q5R1I4 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-2Q5R1I4 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-2Q5R1I4 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Trav6-2Q5R1I4 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.13□□□□□ -0.15
Trav6-2Q5R1I4 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-2Q5R1I4 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.13□□□□□ -0.15
Trav6-2Q5R1I4 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav6-2Q5R1I4 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.13□□□□□ -0.15
Trav6-2Q5R1I4 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-2Q5R1I4 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-2Q5R1I4 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-2Q5R1I4 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.13□□□□□ -0.15
Trav6-2Q5R1I4 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Trav6-2Q5R1I4 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.13□□□□□ -0.15
Trav6-2Q5R1I4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-2Q5R1I4 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Trav6-2Q5R1I4 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-2Q5R1I4 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-2Q5R1I4 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-2Q5R1I4 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-2Q5R1I4 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-2Q5R1I4 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Gm8825-201ENSMUST00000182565 998 ntBASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Gm4518-201ENSMUST00000182638 718 ntBASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.12□□□□□ -0.15
Trav6-2Q5R1I4 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.11□□□□□ -0.15
Trav6-2Q5R1I4 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-2Q5R1I4 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav6-2Q5R1I4 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.11□□□□□ -0.15
Trav6-2Q5R1I4 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-2Q5R1I4 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-2Q5R1I4 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav6-2Q5R1I4 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-2Q5R1I4 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav6-2Q5R1I4 Gm14140-201ENSMUST00000119999 995 ntBASIC14.11□□□□□ -0.15
Trav6-2Q5R1I4 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms