Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fam196aQ3USH1 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fam196aQ3USH1 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fam196aQ3USH1 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Fam196aQ3USH1 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.15■□□□□ 0.18
Fam196aQ3USH1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fam196aQ3USH1 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fam196aQ3USH1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fam196aQ3USH1 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fam196aQ3USH1 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fam196aQ3USH1 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fam196aQ3USH1 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Fam196aQ3USH1 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Fam196aQ3USH1 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Fam196aQ3USH1 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Fam196aQ3USH1 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Fam196aQ3USH1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Fam196aQ3USH1 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Fam196aQ3USH1 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Fam196aQ3USH1 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Fam196aQ3USH1 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Fam196aQ3USH1 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.14■□□□□ 0.17
Fam196aQ3USH1 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.14■□□□□ 0.17
Fam196aQ3USH1 Gm27301-201ENSMUST00000184012 127 ntBASIC16.14■□□□□ 0.17
Fam196aQ3USH1 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.14■□□□□ 0.17
Fam196aQ3USH1 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Fam196aQ3USH1 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Fam196aQ3USH1 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Fam196aQ3USH1 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.14■□□□□ 0.17
Fam196aQ3USH1 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.14■□□□□ 0.17
Fam196aQ3USH1 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Fam196aQ3USH1 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Fam196aQ3USH1 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Fam196aQ3USH1 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Fam196aQ3USH1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Fam196aQ3USH1 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Fam196aQ3USH1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Fam196aQ3USH1 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Fam196aQ3USH1 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Fam196aQ3USH1 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Fam196aQ3USH1 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Fam196aQ3USH1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Fam196aQ3USH1 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Fam196aQ3USH1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Fam196aQ3USH1 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Fam196aQ3USH1 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.13■□□□□ 0.17
Fam196aQ3USH1 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.13■□□□□ 0.17
Fam196aQ3USH1 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.13■□□□□ 0.17
Fam196aQ3USH1 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.13■□□□□ 0.17
Fam196aQ3USH1 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.13■□□□□ 0.17
Fam196aQ3USH1 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Fam196aQ3USH1 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Fam196aQ3USH1 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Fam196aQ3USH1 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Fam196aQ3USH1 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Fam196aQ3USH1 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Fam196aQ3USH1 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Fam196aQ3USH1 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Fam196aQ3USH1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Fam196aQ3USH1 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Fam196aQ3USH1 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Fam196aQ3USH1 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Fam196aQ3USH1 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Fam196aQ3USH1 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.12■□□□□ 0.17
Fam196aQ3USH1 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Fam196aQ3USH1 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Fam196aQ3USH1 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Fam196aQ3USH1 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Fam196aQ3USH1 Gm27437-201ENSMUST00000183429 107 ntBASIC16.12■□□□□ 0.17
Fam196aQ3USH1 Gm27622-201ENSMUST00000183779 60 ntBASIC16.12■□□□□ 0.17
Fam196aQ3USH1 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.12■□□□□ 0.17
Fam196aQ3USH1 Gm45747-201ENSMUST00000212203 999 ntBASIC16.12■□□□□ 0.17
Fam196aQ3USH1 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Fam196aQ3USH1 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC16.12■□□□□ 0.17
Fam196aQ3USH1 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Fam196aQ3USH1 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.12■□□□□ 0.17
Fam196aQ3USH1 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Fam196aQ3USH1 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Fam196aQ3USH1 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Fam196aQ3USH1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Fam196aQ3USH1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Fam196aQ3USH1 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Fam196aQ3USH1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Fam196aQ3USH1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Fam196aQ3USH1 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Fam196aQ3USH1 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Fam196aQ3USH1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Fam196aQ3USH1 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.11■□□□□ 0.17
Fam196aQ3USH1 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Fam196aQ3USH1 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Fam196aQ3USH1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Fam196aQ3USH1 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Fam196aQ3USH1 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Fam196aQ3USH1 Mir449b-201ENSMUST00000104833 80 ntBASIC16.11■□□□□ 0.17
Fam196aQ3USH1 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.11■□□□□ 0.17
Fam196aQ3USH1 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.11■□□□□ 0.17
Fam196aQ3USH1 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.11■□□□□ 0.17
Fam196aQ3USH1 Rprl2-201ENSMUST00000157150 290 ntBASIC16.11■□□□□ 0.17
Fam196aQ3USH1 Gm5866-201ENSMUST00000177881 973 ntBASIC16.11■□□□□ 0.17
Fam196aQ3USH1 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms