Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa3Q3UPR0 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa3Q3UPR0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa3Q3UPR0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa3Q3UPR0 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa3Q3UPR0 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa3Q3UPR0 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa3Q3UPR0 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa3Q3UPR0 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa3Q3UPR0 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.95□□□□□ -0.18
Shisa3Q3UPR0 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.95□□□□□ -0.18
Shisa3Q3UPR0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa3Q3UPR0 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa3Q3UPR0 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa3Q3UPR0 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Shisa3Q3UPR0 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa3Q3UPR0 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa3Q3UPR0 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa3Q3UPR0 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.94□□□□□ -0.18
Shisa3Q3UPR0 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa3Q3UPR0 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa3Q3UPR0 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa3Q3UPR0 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Shisa3Q3UPR0 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
Shisa3Q3UPR0 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa3Q3UPR0 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Shisa3Q3UPR0 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa3Q3UPR0 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Shisa3Q3UPR0 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa3Q3UPR0 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa3Q3UPR0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa3Q3UPR0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Shisa3Q3UPR0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa3Q3UPR0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa3Q3UPR0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa3Q3UPR0 Gm37025-201ENSMUST00000195159 829 ntBASIC13.94□□□□□ -0.18
Shisa3Q3UPR0 Gm3375-201ENSMUST00000203929 796 ntBASIC13.94□□□□□ -0.18
Shisa3Q3UPR0 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa3Q3UPR0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa3Q3UPR0 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa3Q3UPR0 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Shisa3Q3UPR0 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa3Q3UPR0 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Shisa3Q3UPR0 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa3Q3UPR0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Shisa3Q3UPR0 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.94□□□□□ -0.18
Shisa3Q3UPR0 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa3Q3UPR0 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa3Q3UPR0 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa3Q3UPR0 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.93□□□□□ -0.18
Shisa3Q3UPR0 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Shisa3Q3UPR0 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa3Q3UPR0 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa3Q3UPR0 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.93□□□□□ -0.18
Shisa3Q3UPR0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC13.93□□□□□ -0.18
Shisa3Q3UPR0 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa3Q3UPR0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa3Q3UPR0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC13.93□□□□□ -0.18
Shisa3Q3UPR0 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.93□□□□□ -0.18
Shisa3Q3UPR0 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa3Q3UPR0 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa3Q3UPR0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa3Q3UPR0 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa3Q3UPR0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Shisa3Q3UPR0 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa3Q3UPR0 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Shisa3Q3UPR0 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa3Q3UPR0 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa3Q3UPR0 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa3Q3UPR0 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa3Q3UPR0 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa3Q3UPR0 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa3Q3UPR0 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa3Q3UPR0 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Shisa3Q3UPR0 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa3Q3UPR0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa3Q3UPR0 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Shisa3Q3UPR0 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.92□□□□□ -0.18
Shisa3Q3UPR0 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa3Q3UPR0 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa3Q3UPR0 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa3Q3UPR0 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa3Q3UPR0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa3Q3UPR0 Gm15565-201ENSMUST00000118890 427 ntBASIC13.92□□□□□ -0.18
Shisa3Q3UPR0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.92□□□□□ -0.18
Shisa3Q3UPR0 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa3Q3UPR0 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC13.92□□□□□ -0.18
Shisa3Q3UPR0 AC135963.1-201ENSMUST00000211640 717 ntBASIC13.92□□□□□ -0.18
Shisa3Q3UPR0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa3Q3UPR0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa3Q3UPR0 Gm15823-201ENSMUST00000064305 670 ntBASIC13.92□□□□□ -0.18
Shisa3Q3UPR0 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa3Q3UPR0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa3Q3UPR0 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa3Q3UPR0 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa3Q3UPR0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa3Q3UPR0 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa3Q3UPR0 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa3Q3UPR0 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.92□□□□□ -0.18
Shisa3Q3UPR0 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms