Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Upf3bQ3ULL6 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upf3bQ3ULL6 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upf3bQ3ULL6 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Upf3bQ3ULL6 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.26■□□□□ 0.35
Upf3bQ3ULL6 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upf3bQ3ULL6 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upf3bQ3ULL6 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upf3bQ3ULL6 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Upf3bQ3ULL6 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upf3bQ3ULL6 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upf3bQ3ULL6 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.26■□□□□ 0.35
Upf3bQ3ULL6 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Upf3bQ3ULL6 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.26■□□□□ 0.35
Upf3bQ3ULL6 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.26■□□□□ 0.35
Upf3bQ3ULL6 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Upf3bQ3ULL6 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upf3bQ3ULL6 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upf3bQ3ULL6 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Upf3bQ3ULL6 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upf3bQ3ULL6 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.26■□□□□ 0.35
Upf3bQ3ULL6 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upf3bQ3ULL6 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upf3bQ3ULL6 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Upf3bQ3ULL6 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Upf3bQ3ULL6 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Upf3bQ3ULL6 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upf3bQ3ULL6 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upf3bQ3ULL6 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Upf3bQ3ULL6 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Upf3bQ3ULL6 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Upf3bQ3ULL6 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Upf3bQ3ULL6 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Upf3bQ3ULL6 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.25■□□□□ 0.35
Upf3bQ3ULL6 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Upf3bQ3ULL6 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Upf3bQ3ULL6 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.25■□□□□ 0.35
Upf3bQ3ULL6 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Upf3bQ3ULL6 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Upf3bQ3ULL6 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Upf3bQ3ULL6 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Upf3bQ3ULL6 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Upf3bQ3ULL6 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Upf3bQ3ULL6 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.25■□□□□ 0.35
Upf3bQ3ULL6 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.25■□□□□ 0.35
Upf3bQ3ULL6 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Upf3bQ3ULL6 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Upf3bQ3ULL6 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Upf3bQ3ULL6 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Upf3bQ3ULL6 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
Upf3bQ3ULL6 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.25■□□□□ 0.35
Upf3bQ3ULL6 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Upf3bQ3ULL6 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Upf3bQ3ULL6 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.25■□□□□ 0.35
Upf3bQ3ULL6 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Upf3bQ3ULL6 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Upf3bQ3ULL6 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Upf3bQ3ULL6 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.24■□□□□ 0.35
Upf3bQ3ULL6 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Upf3bQ3ULL6 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Upf3bQ3ULL6 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Upf3bQ3ULL6 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Upf3bQ3ULL6 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.24■□□□□ 0.35
Upf3bQ3ULL6 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.24■□□□□ 0.35
Upf3bQ3ULL6 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Upf3bQ3ULL6 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Upf3bQ3ULL6 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.24■□□□□ 0.35
Upf3bQ3ULL6 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Upf3bQ3ULL6 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Upf3bQ3ULL6 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Upf3bQ3ULL6 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Upf3bQ3ULL6 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Upf3bQ3ULL6 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Upf3bQ3ULL6 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Upf3bQ3ULL6 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Upf3bQ3ULL6 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Upf3bQ3ULL6 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Upf3bQ3ULL6 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Upf3bQ3ULL6 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Upf3bQ3ULL6 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Upf3bQ3ULL6 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Upf3bQ3ULL6 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Upf3bQ3ULL6 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Upf3bQ3ULL6 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Upf3bQ3ULL6 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Upf3bQ3ULL6 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Upf3bQ3ULL6 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Upf3bQ3ULL6 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Upf3bQ3ULL6 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
Upf3bQ3ULL6 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
Upf3bQ3ULL6 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Upf3bQ3ULL6 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Upf3bQ3ULL6 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Upf3bQ3ULL6 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.23■□□□□ 0.35
Upf3bQ3ULL6 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.23■□□□□ 0.35
Upf3bQ3ULL6 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Upf3bQ3ULL6 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Upf3bQ3ULL6 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Upf3bQ3ULL6 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Upf3bQ3ULL6 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms