Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.93■□□□□ 0.3
Upf3aQ3ULJ3 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upf3aQ3ULJ3 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Upf3aQ3ULJ3 Gm10175-201ENSMUST00000086013 645 ntBASIC16.93■□□□□ 0.3
Upf3aQ3ULJ3 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Upf3aQ3ULJ3 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Upf3aQ3ULJ3 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upf3aQ3ULJ3 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upf3aQ3ULJ3 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Upf3aQ3ULJ3 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upf3aQ3ULJ3 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upf3aQ3ULJ3 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.93■□□□□ 0.3
Upf3aQ3ULJ3 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Upf3aQ3ULJ3 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Upf3aQ3ULJ3 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.92■□□□□ 0.3
Upf3aQ3ULJ3 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.92■□□□□ 0.3
Upf3aQ3ULJ3 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.92■□□□□ 0.3
Upf3aQ3ULJ3 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.92■□□□□ 0.3
Upf3aQ3ULJ3 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.92■□□□□ 0.3
Upf3aQ3ULJ3 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
Upf3aQ3ULJ3 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.92■□□□□ 0.3
Upf3aQ3ULJ3 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.92■□□□□ 0.3
Upf3aQ3ULJ3 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Upf3aQ3ULJ3 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Upf3aQ3ULJ3 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Upf3aQ3ULJ3 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Upf3aQ3ULJ3 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Upf3aQ3ULJ3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Upf3aQ3ULJ3 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Upf3aQ3ULJ3 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Upf3aQ3ULJ3 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Upf3aQ3ULJ3 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upf3aQ3ULJ3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Upf3aQ3ULJ3 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.91■□□□□ 0.3
Upf3aQ3ULJ3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upf3aQ3ULJ3 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upf3aQ3ULJ3 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Upf3aQ3ULJ3 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upf3aQ3ULJ3 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upf3aQ3ULJ3 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Upf3aQ3ULJ3 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.91■□□□□ 0.3
Upf3aQ3ULJ3 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upf3aQ3ULJ3 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upf3aQ3ULJ3 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.91■□□□□ 0.3
Upf3aQ3ULJ3 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Upf3aQ3ULJ3 Gm25911-201ENSMUST00000157621 56 ntBASIC16.91■□□□□ 0.3
Upf3aQ3ULJ3 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.91■□□□□ 0.3
Upf3aQ3ULJ3 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.91■□□□□ 0.3
Upf3aQ3ULJ3 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upf3aQ3ULJ3 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upf3aQ3ULJ3 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Upf3aQ3ULJ3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upf3aQ3ULJ3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upf3aQ3ULJ3 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upf3aQ3ULJ3 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upf3aQ3ULJ3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Upf3aQ3ULJ3 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Upf3aQ3ULJ3 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upf3aQ3ULJ3 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upf3aQ3ULJ3 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Upf3aQ3ULJ3 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Upf3aQ3ULJ3 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upf3aQ3ULJ3 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upf3aQ3ULJ3 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upf3aQ3ULJ3 Gm14822-201ENSMUST00000122247 291 ntBASIC16.9■□□□□ 0.3
Upf3aQ3ULJ3 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.9■□□□□ 0.3
Upf3aQ3ULJ3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Upf3aQ3ULJ3 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.9■□□□□ 0.3
Upf3aQ3ULJ3 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upf3aQ3ULJ3 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.9■□□□□ 0.3
Upf3aQ3ULJ3 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.9■□□□□ 0.3
Upf3aQ3ULJ3 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upf3aQ3ULJ3 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upf3aQ3ULJ3 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upf3aQ3ULJ3 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.9■□□□□ 0.3
Upf3aQ3ULJ3 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upf3aQ3ULJ3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upf3aQ3ULJ3 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Upf3aQ3ULJ3 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upf3aQ3ULJ3 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upf3aQ3ULJ3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upf3aQ3ULJ3 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upf3aQ3ULJ3 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.89■□□□□ 0.29
Upf3aQ3ULJ3 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Upf3aQ3ULJ3 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.89■□□□□ 0.29
Upf3aQ3ULJ3 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Upf3aQ3ULJ3 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.89■□□□□ 0.29
Upf3aQ3ULJ3 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Upf3aQ3ULJ3 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.89■□□□□ 0.29
Upf3aQ3ULJ3 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upf3aQ3ULJ3 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upf3aQ3ULJ3 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Upf3aQ3ULJ3 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upf3aQ3ULJ3 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Upf3aQ3ULJ3 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upf3aQ3ULJ3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upf3aQ3ULJ3 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upf3aQ3ULJ3 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Upf3aQ3ULJ3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Upf3aQ3ULJ3 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms