Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.37■□□□□ 0.37
Snx27Q3UHD6 Gm18622-201ENSMUST00000219361 595 ntBASIC17.37■□□□□ 0.37
Snx27Q3UHD6 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Snx27Q3UHD6 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Snx27Q3UHD6 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.37■□□□□ 0.37
Snx27Q3UHD6 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Snx27Q3UHD6 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Snx27Q3UHD6 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.37■□□□□ 0.37
Snx27Q3UHD6 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Snx27Q3UHD6 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Snx27Q3UHD6 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Snx27Q3UHD6 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Snx27Q3UHD6 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Snx27Q3UHD6 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Snx27Q3UHD6 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Snx27Q3UHD6 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.36■□□□□ 0.37
Snx27Q3UHD6 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.36■□□□□ 0.37
Snx27Q3UHD6 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.36■□□□□ 0.37
Snx27Q3UHD6 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.36■□□□□ 0.37
Snx27Q3UHD6 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.36■□□□□ 0.37
Snx27Q3UHD6 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.36■□□□□ 0.37
Snx27Q3UHD6 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Snx27Q3UHD6 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Snx27Q3UHD6 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.36■□□□□ 0.37
Snx27Q3UHD6 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Snx27Q3UHD6 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.36■□□□□ 0.37
Snx27Q3UHD6 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.36■□□□□ 0.37
Snx27Q3UHD6 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.36■□□□□ 0.37
Snx27Q3UHD6 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.36■□□□□ 0.37
Snx27Q3UHD6 Gm8825-201ENSMUST00000182565 998 ntBASIC17.36■□□□□ 0.37
Snx27Q3UHD6 Gm4518-201ENSMUST00000182638 718 ntBASIC17.36■□□□□ 0.37
Snx27Q3UHD6 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.36■□□□□ 0.37
Snx27Q3UHD6 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.36■□□□□ 0.37
Snx27Q3UHD6 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.36■□□□□ 0.37
Snx27Q3UHD6 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Snx27Q3UHD6 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Snx27Q3UHD6 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.36■□□□□ 0.37
Snx27Q3UHD6 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Snx27Q3UHD6 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.36■□□□□ 0.37
Snx27Q3UHD6 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Snx27Q3UHD6 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Snx27Q3UHD6 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Snx27Q3UHD6 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Snx27Q3UHD6 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Snx27Q3UHD6 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snx27Q3UHD6 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snx27Q3UHD6 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snx27Q3UHD6 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Snx27Q3UHD6 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snx27Q3UHD6 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snx27Q3UHD6 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.35■□□□□ 0.37
Snx27Q3UHD6 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snx27Q3UHD6 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snx27Q3UHD6 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.35■□□□□ 0.37
Snx27Q3UHD6 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Snx27Q3UHD6 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.35■□□□□ 0.37
Snx27Q3UHD6 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.35■□□□□ 0.37
Snx27Q3UHD6 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snx27Q3UHD6 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snx27Q3UHD6 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snx27Q3UHD6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snx27Q3UHD6 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snx27Q3UHD6 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snx27Q3UHD6 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Snx27Q3UHD6 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Snx27Q3UHD6 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Snx27Q3UHD6 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Snx27Q3UHD6 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Snx27Q3UHD6 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Snx27Q3UHD6 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Snx27Q3UHD6 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Snx27Q3UHD6 Gm1401-201ENSMUST00000122048 772 ntBASIC17.34■□□□□ 0.37
Snx27Q3UHD6 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Snx27Q3UHD6 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.34■□□□□ 0.37
Snx27Q3UHD6 Gm6550-201ENSMUST00000187574 993 ntBASIC17.34■□□□□ 0.37
Snx27Q3UHD6 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.34■□□□□ 0.37
Snx27Q3UHD6 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.34■□□□□ 0.37
Snx27Q3UHD6 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Snx27Q3UHD6 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Snx27Q3UHD6 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Snx27Q3UHD6 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Snx27Q3UHD6 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Snx27Q3UHD6 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Snx27Q3UHD6 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Snx27Q3UHD6 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Snx27Q3UHD6 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Snx27Q3UHD6 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Snx27Q3UHD6 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Snx27Q3UHD6 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Snx27Q3UHD6 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Snx27Q3UHD6 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Snx27Q3UHD6 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Snx27Q3UHD6 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Snx27Q3UHD6 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Snx27Q3UHD6 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Snx27Q3UHD6 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Snx27Q3UHD6 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Snx27Q3UHD6 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Snx27Q3UHD6 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Snx27Q3UHD6 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms