Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Khdc4Q3TCX3 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Khdc4Q3TCX3 Gm13884-201ENSMUST00000118103 829 ntBASIC15.32■□□□□ 0.04
Khdc4Q3TCX3 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.32■□□□□ 0.04
Khdc4Q3TCX3 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.32■□□□□ 0.04
Khdc4Q3TCX3 Gm18421-201ENSMUST00000204122 625 ntBASIC15.32■□□□□ 0.04
Khdc4Q3TCX3 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Khdc4Q3TCX3 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Khdc4Q3TCX3 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Khdc4Q3TCX3 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Khdc4Q3TCX3 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Khdc4Q3TCX3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Khdc4Q3TCX3 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Khdc4Q3TCX3 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Khdc4Q3TCX3 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Khdc4Q3TCX3 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Khdc4Q3TCX3 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Khdc4Q3TCX3 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Khdc4Q3TCX3 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Khdc4Q3TCX3 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Khdc4Q3TCX3 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Khdc4Q3TCX3 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc4Q3TCX3 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc4Q3TCX3 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Khdc4Q3TCX3 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc4Q3TCX3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc4Q3TCX3 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc4Q3TCX3 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc4Q3TCX3 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Khdc4Q3TCX3 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc4Q3TCX3 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.31■□□□□ 0.04
Khdc4Q3TCX3 Gm10052-201ENSMUST00000168019 960 ntBASIC15.31■□□□□ 0.04
Khdc4Q3TCX3 Gm29707-201ENSMUST00000196325 491 ntBASIC15.31■□□□□ 0.04
Khdc4Q3TCX3 Gm44450-201ENSMUST00000199528 114 ntBASIC15.31■□□□□ 0.04
Khdc4Q3TCX3 Gm6443-201ENSMUST00000203599 874 ntBASIC15.31■□□□□ 0.04
Khdc4Q3TCX3 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc4Q3TCX3 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc4Q3TCX3 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc4Q3TCX3 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc4Q3TCX3 Gm7729-201ENSMUST00000050143 801 ntBASIC15.31■□□□□ 0.04
Khdc4Q3TCX3 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc4Q3TCX3 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc4Q3TCX3 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc4Q3TCX3 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc4Q3TCX3 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc4Q3TCX3 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc4Q3TCX3 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc4Q3TCX3 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Khdc4Q3TCX3 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc4Q3TCX3 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc4Q3TCX3 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Khdc4Q3TCX3 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc4Q3TCX3 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc4Q3TCX3 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc4Q3TCX3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc4Q3TCX3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc4Q3TCX3 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc4Q3TCX3 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.3■□□□□ 0.04
Khdc4Q3TCX3 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Khdc4Q3TCX3 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.3■□□□□ 0.04
Khdc4Q3TCX3 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Khdc4Q3TCX3 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Khdc4Q3TCX3 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Khdc4Q3TCX3 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Khdc4Q3TCX3 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Khdc4Q3TCX3 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Khdc4Q3TCX3 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Khdc4Q3TCX3 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Khdc4Q3TCX3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.3■□□□□ 0.04
Khdc4Q3TCX3 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Khdc4Q3TCX3 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Khdc4Q3TCX3 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Khdc4Q3TCX3 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Khdc4Q3TCX3 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Khdc4Q3TCX3 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Khdc4Q3TCX3 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.3■□□□□ 0.04
Khdc4Q3TCX3 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Khdc4Q3TCX3 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.3■□□□□ 0.04
Khdc4Q3TCX3 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Khdc4Q3TCX3 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Khdc4Q3TCX3 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Khdc4Q3TCX3 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Khdc4Q3TCX3 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Khdc4Q3TCX3 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Khdc4Q3TCX3 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Khdc4Q3TCX3 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Khdc4Q3TCX3 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Khdc4Q3TCX3 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Khdc4Q3TCX3 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Khdc4Q3TCX3 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Khdc4Q3TCX3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Khdc4Q3TCX3 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc4Q3TCX3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc4Q3TCX3 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc4Q3TCX3 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Khdc4Q3TCX3 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc4Q3TCX3 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc4Q3TCX3 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc4Q3TCX3 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Khdc4Q3TCX3 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms