Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nhej1Q3KNJ2 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.23■□□□□ 0.35
Nhej1Q3KNJ2 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nhej1Q3KNJ2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Nhej1Q3KNJ2 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nhej1Q3KNJ2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nhej1Q3KNJ2 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.23■□□□□ 0.35
Nhej1Q3KNJ2 Gm2274-201ENSMUST00000184539 609 ntBASIC17.23■□□□□ 0.35
Nhej1Q3KNJ2 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Nhej1Q3KNJ2 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.23■□□□□ 0.35
Nhej1Q3KNJ2 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nhej1Q3KNJ2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.23■□□□□ 0.35
Nhej1Q3KNJ2 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nhej1Q3KNJ2 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nhej1Q3KNJ2 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nhej1Q3KNJ2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nhej1Q3KNJ2 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nhej1Q3KNJ2 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nhej1Q3KNJ2 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.23■□□□□ 0.35
Nhej1Q3KNJ2 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nhej1Q3KNJ2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nhej1Q3KNJ2 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nhej1Q3KNJ2 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nhej1Q3KNJ2 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nhej1Q3KNJ2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.22■□□□□ 0.35
Nhej1Q3KNJ2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Nhej1Q3KNJ2 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Nhej1Q3KNJ2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nhej1Q3KNJ2 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.22■□□□□ 0.35
Nhej1Q3KNJ2 Gm10812-201ENSMUST00000099864 546 ntBASIC17.22■□□□□ 0.35
Nhej1Q3KNJ2 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nhej1Q3KNJ2 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nhej1Q3KNJ2 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nhej1Q3KNJ2 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nhej1Q3KNJ2 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Nhej1Q3KNJ2 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Nhej1Q3KNJ2 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Nhej1Q3KNJ2 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nhej1Q3KNJ2 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.21■□□□□ 0.35
Nhej1Q3KNJ2 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nhej1Q3KNJ2 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nhej1Q3KNJ2 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nhej1Q3KNJ2 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Nhej1Q3KNJ2 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.21■□□□□ 0.35
Nhej1Q3KNJ2 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Nhej1Q3KNJ2 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nhej1Q3KNJ2 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.21■□□□□ 0.35
Nhej1Q3KNJ2 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nhej1Q3KNJ2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nhej1Q3KNJ2 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Nhej1Q3KNJ2 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Nhej1Q3KNJ2 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nhej1Q3KNJ2 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Nhej1Q3KNJ2 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Nhej1Q3KNJ2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Nhej1Q3KNJ2 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Nhej1Q3KNJ2 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Nhej1Q3KNJ2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Nhej1Q3KNJ2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nhej1Q3KNJ2 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.2■□□□□ 0.34
Nhej1Q3KNJ2 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nhej1Q3KNJ2 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nhej1Q3KNJ2 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nhej1Q3KNJ2 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nhej1Q3KNJ2 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nhej1Q3KNJ2 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nhej1Q3KNJ2 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.2■□□□□ 0.34
Nhej1Q3KNJ2 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.2■□□□□ 0.34
Nhej1Q3KNJ2 Gm7213-201ENSMUST00000215977 950 ntBASIC17.2■□□□□ 0.34
Nhej1Q3KNJ2 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nhej1Q3KNJ2 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nhej1Q3KNJ2 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Nhej1Q3KNJ2 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nhej1Q3KNJ2 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.2■□□□□ 0.34
Nhej1Q3KNJ2 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Nhej1Q3KNJ2 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Nhej1Q3KNJ2 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nhej1Q3KNJ2 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nhej1Q3KNJ2 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nhej1Q3KNJ2 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nhej1Q3KNJ2 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nhej1Q3KNJ2 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nhej1Q3KNJ2 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nhej1Q3KNJ2 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nhej1Q3KNJ2 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nhej1Q3KNJ2 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nhej1Q3KNJ2 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nhej1Q3KNJ2 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nhej1Q3KNJ2 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.19■□□□□ 0.34
Nhej1Q3KNJ2 Gm22240-201ENSMUST00000175225 82 ntBASIC17.19■□□□□ 0.34
Nhej1Q3KNJ2 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nhej1Q3KNJ2 Gm5417-201ENSMUST00000079706 384 ntBASIC17.19■□□□□ 0.34
Nhej1Q3KNJ2 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nhej1Q3KNJ2 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nhej1Q3KNJ2 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Nhej1Q3KNJ2 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nhej1Q3KNJ2 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nhej1Q3KNJ2 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.19■□□□□ 0.34
Nhej1Q3KNJ2 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nhej1Q3KNJ2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms