Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Thumpd3P97770 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Thumpd3P97770 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Thumpd3P97770 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Thumpd3P97770 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.44■□□□□ 0.22
Thumpd3P97770 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Thumpd3P97770 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Thumpd3P97770 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Thumpd3P97770 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Thumpd3P97770 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Thumpd3P97770 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
Thumpd3P97770 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.44■□□□□ 0.22
Thumpd3P97770 Gm18101-201ENSMUST00000215769 548 ntBASIC16.44■□□□□ 0.22
Thumpd3P97770 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Thumpd3P97770 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Thumpd3P97770 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.44■□□□□ 0.22
Thumpd3P97770 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Thumpd3P97770 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.44■□□□□ 0.22
Thumpd3P97770 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Thumpd3P97770 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.44■□□□□ 0.22
Thumpd3P97770 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Thumpd3P97770 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Thumpd3P97770 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Thumpd3P97770 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Thumpd3P97770 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Thumpd3P97770 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Thumpd3P97770 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Thumpd3P97770 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Thumpd3P97770 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Thumpd3P97770 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Thumpd3P97770 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Thumpd3P97770 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.43■□□□□ 0.22
Thumpd3P97770 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Thumpd3P97770 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Thumpd3P97770 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Thumpd3P97770 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Thumpd3P97770 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Thumpd3P97770 Gm22697-201ENSMUST00000175194 63 ntBASIC16.43■□□□□ 0.22
Thumpd3P97770 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.43■□□□□ 0.22
Thumpd3P97770 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.43■□□□□ 0.22
Thumpd3P97770 Gm7791-201ENSMUST00000219066 539 ntBASIC16.43■□□□□ 0.22
Thumpd3P97770 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Thumpd3P97770 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Thumpd3P97770 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Thumpd3P97770 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Thumpd3P97770 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Thumpd3P97770 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Thumpd3P97770 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Thumpd3P97770 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Thumpd3P97770 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
Thumpd3P97770 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Thumpd3P97770 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Thumpd3P97770 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Thumpd3P97770 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Thumpd3P97770 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Thumpd3P97770 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Thumpd3P97770 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Thumpd3P97770 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Thumpd3P97770 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Thumpd3P97770 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Thumpd3P97770 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Thumpd3P97770 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Thumpd3P97770 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Thumpd3P97770 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.42■□□□□ 0.22
Thumpd3P97770 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.42■□□□□ 0.22
Thumpd3P97770 AA414768-201ENSMUST00000121924 1257 ntBASIC16.42■□□□□ 0.22
Thumpd3P97770 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.42■□□□□ 0.22
Thumpd3P97770 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.42■□□□□ 0.22
Thumpd3P97770 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.42■□□□□ 0.22
Thumpd3P97770 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.42■□□□□ 0.22
Thumpd3P97770 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Thumpd3P97770 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Thumpd3P97770 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Thumpd3P97770 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Thumpd3P97770 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Thumpd3P97770 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Thumpd3P97770 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.42■□□□□ 0.22
Thumpd3P97770 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Thumpd3P97770 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Thumpd3P97770 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.41■□□□□ 0.22
Thumpd3P97770 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Thumpd3P97770 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.41■□□□□ 0.22
Thumpd3P97770 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Thumpd3P97770 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Thumpd3P97770 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Thumpd3P97770 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.41■□□□□ 0.22
Thumpd3P97770 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.41■□□□□ 0.22
Thumpd3P97770 Gm16061-201ENSMUST00000122167 857 ntBASIC16.41■□□□□ 0.22
Thumpd3P97770 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Thumpd3P97770 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Thumpd3P97770 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Thumpd3P97770 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Thumpd3P97770 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Thumpd3P97770 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Thumpd3P97770 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Thumpd3P97770 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Thumpd3P97770 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Thumpd3P97770 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Thumpd3P97770 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Thumpd3P97770 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms