Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx1P63006 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.81■□□□□ 0.12
Lhx1P63006 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx1P63006 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx1P63006 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.81■□□□□ 0.12
Lhx1P63006 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.81■□□□□ 0.12
Lhx1P63006 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.81■□□□□ 0.12
Lhx1P63006 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.81■□□□□ 0.12
Lhx1P63006 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx1P63006 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx1P63006 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx1P63006 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx1P63006 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx1P63006 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx1P63006 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Lhx1P63006 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx1P63006 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx1P63006 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx1P63006 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx1P63006 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx1P63006 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Lhx1P63006 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Lhx1P63006 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lhx1P63006 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lhx1P63006 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lhx1P63006 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lhx1P63006 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Lhx1P63006 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Lhx1P63006 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lhx1P63006 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.8■□□□□ 0.12
Lhx1P63006 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lhx1P63006 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.8■□□□□ 0.12
Lhx1P63006 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Lhx1P63006 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.8■□□□□ 0.12
Lhx1P63006 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.8■□□□□ 0.12
Lhx1P63006 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lhx1P63006 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.8■□□□□ 0.12
Lhx1P63006 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lhx1P63006 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Lhx1P63006 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
Lhx1P63006 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Lhx1P63006 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lhx1P63006 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lhx1P63006 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lhx1P63006 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lhx1P63006 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lhx1P63006 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lhx1P63006 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lhx1P63006 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lhx1P63006 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lhx1P63006 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Lhx1P63006 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lhx1P63006 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.79■□□□□ 0.12
Lhx1P63006 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Lhx1P63006 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lhx1P63006 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lhx1P63006 Gm7506-201ENSMUST00000207758 815 ntBASIC15.79■□□□□ 0.12
Lhx1P63006 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lhx1P63006 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Lhx1P63006 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lhx1P63006 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lhx1P63006 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lhx1P63006 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lhx1P63006 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lhx1P63006 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lhx1P63006 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lhx1P63006 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Lhx1P63006 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.78■□□□□ 0.12
Lhx1P63006 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Lhx1P63006 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Lhx1P63006 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lhx1P63006 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Lhx1P63006 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lhx1P63006 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lhx1P63006 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lhx1P63006 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.78■□□□□ 0.12
Lhx1P63006 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.78■□□□□ 0.12
Lhx1P63006 Gm7461-201ENSMUST00000058918 827 ntBASIC15.78■□□□□ 0.12
Lhx1P63006 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lhx1P63006 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Lhx1P63006 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lhx1P63006 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Lhx1P63006 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Lhx1P63006 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lhx1P63006 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lhx1P63006 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Lhx1P63006 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lhx1P63006 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lhx1P63006 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lhx1P63006 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lhx1P63006 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lhx1P63006 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lhx1P63006 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Lhx1P63006 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.78■□□□□ 0.12
Lhx1P63006 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lhx1P63006 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lhx1P63006 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lhx1P63006 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lhx1P63006 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lhx1P63006 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms