Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.62□□□□□ -0.23
Gabra1P62812 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gabra1P62812 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gabra1P62812 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gabra1P62812 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gabra1P62812 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gabra1P62812 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gabra1P62812 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gabra1P62812 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.62□□□□□ -0.23
Gabra1P62812 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gabra1P62812 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Gabra1P62812 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gabra1P62812 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gabra1P62812 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gabra1P62812 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gabra1P62812 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gabra1P62812 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gabra1P62812 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gabra1P62812 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.62□□□□□ -0.23
Gabra1P62812 Gm2559-201ENSMUST00000201323 363 ntBASIC13.62□□□□□ -0.23
Gabra1P62812 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Gabra1P62812 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gabra1P62812 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gabra1P62812 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gabra1P62812 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gabra1P62812 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gabra1P62812 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gabra1P62812 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Gabra1P62812 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Gabra1P62812 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.61□□□□□ -0.23
Gabra1P62812 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gabra1P62812 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Gabra1P62812 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Gabra1P62812 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gabra1P62812 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Gabra1P62812 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gabra1P62812 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gabra1P62812 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gabra1P62812 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gabra1P62812 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gabra1P62812 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gabra1P62812 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gabra1P62812 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Gabra1P62812 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Gabra1P62812 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gabra1P62812 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Gabra1P62812 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gabra1P62812 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gabra1P62812 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gabra1P62812 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.61□□□□□ -0.23
Gabra1P62812 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gabra1P62812 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gabra1P62812 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Gabra1P62812 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gabra1P62812 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Gabra1P62812 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.61□□□□□ -0.23
Gabra1P62812 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gabra1P62812 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gabra1P62812 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Gabra1P62812 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gabra1P62812 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.61□□□□□ -0.23
Gabra1P62812 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Gabra1P62812 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gabra1P62812 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gabra1P62812 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.6□□□□□ -0.23
Gabra1P62812 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gabra1P62812 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Gabra1P62812 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.6□□□□□ -0.23
Gabra1P62812 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gabra1P62812 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gabra1P62812 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gabra1P62812 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gabra1P62812 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gabra1P62812 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13.6□□□□□ -0.23
Gabra1P62812 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Gabra1P62812 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gabra1P62812 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gabra1P62812 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gabra1P62812 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.6□□□□□ -0.23
Gabra1P62812 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gabra1P62812 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gabra1P62812 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gabra1P62812 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gabra1P62812 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gabra1P62812 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gabra1P62812 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gabra1P62812 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gabra1P62812 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gabra1P62812 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gabra1P62812 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gabra1P62812 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.59□□□□□ -0.23
Gabra1P62812 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Gabra1P62812 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gabra1P62812 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gabra1P62812 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Gabra1P62812 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gabra1P62812 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gabra1P62812 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gabra1P62812 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gabra1P62812 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms