Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.15□□□□□ -0.14
Lsm6P62313 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm6P62313 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm6P62313 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm6P62313 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm6P62313 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm6P62313 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.15□□□□□ -0.14
Lsm6P62313 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm6P62313 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm6P62313 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm6P62313 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm6P62313 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Lsm6P62313 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm6P62313 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm6P62313 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm6P62313 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm6P62313 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm6P62313 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm6P62313 Gm6623-201ENSMUST00000173570 544 ntBASIC14.15□□□□□ -0.14
Lsm6P62313 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm6P62313 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm6P62313 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Lsm6P62313 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Lsm6P62313 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm6P62313 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm6P62313 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm6P62313 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm6P62313 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm6P62313 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Lsm6P62313 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm6P62313 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm6P62313 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm6P62313 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm6P62313 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
Lsm6P62313 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm6P62313 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Lsm6P62313 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm6P62313 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm6P62313 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm6P62313 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm6P62313 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Lsm6P62313 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm6P62313 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm6P62313 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm6P62313 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm6P62313 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm6P62313 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm6P62313 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm6P62313 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm6P62313 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm6P62313 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm6P62313 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm6P62313 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm6P62313 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm6P62313 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm6P62313 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
Lsm6P62313 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm6P62313 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm6P62313 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm6P62313 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.14□□□□□ -0.15
Lsm6P62313 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm6P62313 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm6P62313 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Lsm6P62313 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm6P62313 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Lsm6P62313 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm6P62313 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Lsm6P62313 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.13□□□□□ -0.15
Lsm6P62313 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm6P62313 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm6P62313 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm6P62313 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.13□□□□□ -0.15
Lsm6P62313 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Lsm6P62313 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Lsm6P62313 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.13□□□□□ -0.15
Lsm6P62313 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm6P62313 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm6P62313 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.13□□□□□ -0.15
Lsm6P62313 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Lsm6P62313 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm6P62313 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm6P62313 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Lsm6P62313 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm6P62313 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm6P62313 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm6P62313 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm6P62313 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm6P62313 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.13□□□□□ -0.15
Lsm6P62313 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm6P62313 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.13□□□□□ -0.15
Lsm6P62313 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.13□□□□□ -0.15
Lsm6P62313 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm6P62313 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm6P62313 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm6P62313 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm6P62313 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm6P62313 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.12□□□□□ -0.15
Lsm6P62313 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm6P62313 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.12□□□□□ -0.15
Lsm6P62313 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms