Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tpm1P58771 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tpm1P58771 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tpm1P58771 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tpm1P58771 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tpm1P58771 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tpm1P58771 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Tpm1P58771 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tpm1P58771 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Tpm1P58771 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Tpm1P58771 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tpm1P58771 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tpm1P58771 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.03■□□□□ 0.48
Tpm1P58771 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.03■□□□□ 0.48
Tpm1P58771 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Tpm1P58771 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tpm1P58771 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tpm1P58771 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tpm1P58771 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Tpm1P58771 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
Tpm1P58771 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tpm1P58771 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tpm1P58771 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tpm1P58771 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tpm1P58771 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tpm1P58771 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tpm1P58771 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tpm1P58771 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.02■□□□□ 0.48
Tpm1P58771 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tpm1P58771 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Tpm1P58771 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tpm1P58771 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tpm1P58771 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tpm1P58771 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tpm1P58771 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Tpm1P58771 Gm38027-201ENSMUST00000192315 235 ntBASIC18.02■□□□□ 0.48
Tpm1P58771 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.02■□□□□ 0.48
Tpm1P58771 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tpm1P58771 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tpm1P58771 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Tpm1P58771 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Tpm1P58771 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Tpm1P58771 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tpm1P58771 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tpm1P58771 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tpm1P58771 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Tpm1P58771 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tpm1P58771 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Tpm1P58771 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tpm1P58771 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.47
Tpm1P58771 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tpm1P58771 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tpm1P58771 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Tpm1P58771 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tpm1P58771 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tpm1P58771 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.01■□□□□ 0.47
Tpm1P58771 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tpm1P58771 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tpm1P58771 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Tpm1P58771 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Tpm1P58771 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tpm1P58771 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tpm1P58771 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tpm1P58771 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tpm1P58771 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tpm1P58771 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tpm1P58771 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tpm1P58771 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Tpm1P58771 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
Tpm1P58771 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Tpm1P58771 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18■□□□□ 0.47
Tpm1P58771 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tpm1P58771 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC18■□□□□ 0.47
Tpm1P58771 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Tpm1P58771 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tpm1P58771 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tpm1P58771 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18■□□□□ 0.47
Tpm1P58771 AC164629.5-201ENSMUST00000220387 632 ntBASIC18■□□□□ 0.47
Tpm1P58771 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Tpm1P58771 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Tpm1P58771 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Tpm1P58771 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tpm1P58771 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tpm1P58771 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tpm1P58771 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tpm1P58771 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tpm1P58771 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Tpm1P58771 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tpm1P58771 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tpm1P58771 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tpm1P58771 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Tpm1P58771 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tpm1P58771 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tpm1P58771 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tpm1P58771 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Tpm1P58771 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tpm1P58771 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tpm1P58771 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tpm1P58771 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tpm1P58771 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms