Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdsp1P58466 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdsp1P58466 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdsp1P58466 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdsp1P58466 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdsp1P58466 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdsp1P58466 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.68□□□□□ -0.38
Ctdsp1P58466 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdsp1P58466 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Ctdsp1P58466 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdsp1P58466 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdsp1P58466 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ctdsp1P58466 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdsp1P58466 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdsp1P58466 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdsp1P58466 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdsp1P58466 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdsp1P58466 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ctdsp1P58466 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdsp1P58466 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC12.67□□□□□ -0.38
Ctdsp1P58466 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC12.67□□□□□ -0.38
Ctdsp1P58466 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ctdsp1P58466 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdsp1P58466 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdsp1P58466 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC12.67□□□□□ -0.38
Ctdsp1P58466 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ctdsp1P58466 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Ctdsp1P58466 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdsp1P58466 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdsp1P58466 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdsp1P58466 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ctdsp1P58466 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdsp1P58466 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdsp1P58466 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Ctdsp1P58466 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdsp1P58466 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdsp1P58466 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdsp1P58466 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdsp1P58466 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdsp1P58466 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdsp1P58466 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdsp1P58466 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.67□□□□□ -0.38
Ctdsp1P58466 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdsp1P58466 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdsp1P58466 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdsp1P58466 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdsp1P58466 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdsp1P58466 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdsp1P58466 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ctdsp1P58466 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdsp1P58466 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdsp1P58466 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdsp1P58466 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdsp1P58466 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Ctdsp1P58466 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdsp1P58466 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdsp1P58466 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdsp1P58466 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Ctdsp1P58466 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ctdsp1P58466 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdsp1P58466 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdsp1P58466 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdsp1P58466 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdsp1P58466 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdsp1P58466 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdsp1P58466 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdsp1P58466 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdsp1P58466 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdsp1P58466 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ctdsp1P58466 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ctdsp1P58466 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ctdsp1P58466 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ctdsp1P58466 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC12.65□□□□□ -0.38
Ctdsp1P58466 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Ctdsp1P58466 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ctdsp1P58466 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ctdsp1P58466 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ctdsp1P58466 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ctdsp1P58466 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Ctdsp1P58466 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ctdsp1P58466 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ctdsp1P58466 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Ctdsp1P58466 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ctdsp1P58466 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ctdsp1P58466 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ctdsp1P58466 Gm11643-201ENSMUST00000119578 864 ntBASIC12.65□□□□□ -0.38
Ctdsp1P58466 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC12.65□□□□□ -0.38
Ctdsp1P58466 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ctdsp1P58466 Wdr70-203ENSMUST00000227371 1130 ntBASIC12.65□□□□□ -0.38
Ctdsp1P58466 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ctdsp1P58466 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ctdsp1P58466 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ctdsp1P58466 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Ctdsp1P58466 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ctdsp1P58466 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Ctdsp1P58466 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.65□□□□□ -0.38
Ctdsp1P58466 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ctdsp1P58466 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ctdsp1P58466 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Ctdsp1P58466 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms