Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Sssca1P56873 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sssca1P56873 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sssca1P56873 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sssca1P56873 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sssca1P56873 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sssca1P56873 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sssca1P56873 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Sssca1P56873 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sssca1P56873 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sssca1P56873 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sssca1P56873 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sssca1P56873 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sssca1P56873 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sssca1P56873 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sssca1P56873 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sssca1P56873 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sssca1P56873 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sssca1P56873 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sssca1P56873 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sssca1P56873 Prob1-201ENSMUST00000097619 3021 ntBASIC13.06□□□□□ -0.32
Sssca1P56873 Mir1199-201ENSMUST00000117015 119 ntBASIC13.06□□□□□ -0.32
Sssca1P56873 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sssca1P56873 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sssca1P56873 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sssca1P56873 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sssca1P56873 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sssca1P56873 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sssca1P56873 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sssca1P56873 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.06□□□□□ -0.32
Sssca1P56873 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sssca1P56873 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sssca1P56873 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sssca1P56873 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sssca1P56873 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sssca1P56873 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sssca1P56873 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sssca1P56873 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sssca1P56873 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sssca1P56873 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sssca1P56873 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sssca1P56873 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sssca1P56873 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sssca1P56873 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.05□□□□□ -0.32
Sssca1P56873 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sssca1P56873 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sssca1P56873 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sssca1P56873 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.05□□□□□ -0.32
Sssca1P56873 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.05□□□□□ -0.32
Sssca1P56873 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sssca1P56873 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Sssca1P56873 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sssca1P56873 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sssca1P56873 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sssca1P56873 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.05□□□□□ -0.32
Sssca1P56873 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sssca1P56873 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.05□□□□□ -0.32
Sssca1P56873 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sssca1P56873 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sssca1P56873 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.05□□□□□ -0.32
Sssca1P56873 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sssca1P56873 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sssca1P56873 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sssca1P56873 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sssca1P56873 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sssca1P56873 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sssca1P56873 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sssca1P56873 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sssca1P56873 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sssca1P56873 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.04□□□□□ -0.32
Sssca1P56873 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.04□□□□□ -0.32
Sssca1P56873 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.04□□□□□ -0.32
Sssca1P56873 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sssca1P56873 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sssca1P56873 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sssca1P56873 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sssca1P56873 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Sssca1P56873 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sssca1P56873 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sssca1P56873 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sssca1P56873 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Sssca1P56873 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sssca1P56873 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sssca1P56873 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Sssca1P56873 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sssca1P56873 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sssca1P56873 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sssca1P56873 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sssca1P56873 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sssca1P56873 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sssca1P56873 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sssca1P56873 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Sssca1P56873 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sssca1P56873 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sssca1P56873 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sssca1P56873 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sssca1P56873 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sssca1P56873 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sssca1P56873 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sssca1P56873 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms