Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.95■□□□□ 0.3
NcanP55066 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NcanP55066 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
NcanP55066 Grk6-207ENSMUST00000225925 2769 ntBASIC16.95■□□□□ 0.3
NcanP55066 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NcanP55066 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NcanP55066 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NcanP55066 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.95■□□□□ 0.3
NcanP55066 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.3
NcanP55066 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.95■□□□□ 0.3
NcanP55066 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.95■□□□□ 0.3
NcanP55066 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NcanP55066 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NcanP55066 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NcanP55066 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NcanP55066 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.94■□□□□ 0.3
NcanP55066 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.94■□□□□ 0.3
NcanP55066 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.94■□□□□ 0.3
NcanP55066 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NcanP55066 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.94■□□□□ 0.3
NcanP55066 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
NcanP55066 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NcanP55066 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NcanP55066 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NcanP55066 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.94■□□□□ 0.3
NcanP55066 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NcanP55066 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
NcanP55066 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
NcanP55066 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
NcanP55066 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.93■□□□□ 0.3
NcanP55066 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NcanP55066 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NcanP55066 Gm8344-201ENSMUST00000119813 856 ntBASIC16.93■□□□□ 0.3
NcanP55066 Rprl2-201ENSMUST00000157150 290 ntBASIC16.93■□□□□ 0.3
NcanP55066 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.93■□□□□ 0.3
NcanP55066 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
NcanP55066 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
NcanP55066 AC130829.1-201ENSMUST00000221548 494 ntBASIC16.93■□□□□ 0.3
NcanP55066 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NcanP55066 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NcanP55066 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NcanP55066 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NcanP55066 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
NcanP55066 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NcanP55066 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
NcanP55066 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NcanP55066 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NcanP55066 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.93■□□□□ 0.3
NcanP55066 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NcanP55066 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NcanP55066 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NcanP55066 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NcanP55066 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NcanP55066 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.92■□□□□ 0.3
NcanP55066 Gm12151-201ENSMUST00000121374 290 ntBASIC16.92■□□□□ 0.3
NcanP55066 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.92■□□□□ 0.3
NcanP55066 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NcanP55066 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NcanP55066 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC16.92■□□□□ 0.3
NcanP55066 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC16.92■□□□□ 0.3
NcanP55066 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
NcanP55066 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NcanP55066 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
NcanP55066 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NcanP55066 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NcanP55066 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NcanP55066 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NcanP55066 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NcanP55066 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NcanP55066 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NcanP55066 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NcanP55066 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NcanP55066 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.92■□□□□ 0.3
NcanP55066 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NcanP55066 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NcanP55066 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NcanP55066 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NcanP55066 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
NcanP55066 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
NcanP55066 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NcanP55066 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.91■□□□□ 0.3
NcanP55066 Gm7774-201ENSMUST00000200064 533 ntBASIC16.91■□□□□ 0.3
NcanP55066 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC16.91■□□□□ 0.3
NcanP55066 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
NcanP55066 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NcanP55066 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NcanP55066 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NcanP55066 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NcanP55066 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NcanP55066 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NcanP55066 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NcanP55066 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NcanP55066 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.9■□□□□ 0.3
NcanP55066 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
NcanP55066 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NcanP55066 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NcanP55066 Gm6912-201ENSMUST00000117218 544 ntBASIC16.9■□□□□ 0.3
NcanP55066 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC16.9■□□□□ 0.3
NcanP55066 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.9■□□□□ 0.3
NcanP55066 Gm18489-201ENSMUST00000172565 551 ntBASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms