Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx3P50481 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Lhx3P50481 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx3P50481 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx3P50481 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx3P50481 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx3P50481 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx3P50481 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Lhx3P50481 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx3P50481 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.32■□□□□ 0.2
Lhx3P50481 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx3P50481 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Lhx3P50481 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx3P50481 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx3P50481 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx3P50481 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Lhx3P50481 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.32■□□□□ 0.2
Lhx3P50481 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.32■□□□□ 0.2
Lhx3P50481 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx3P50481 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.32■□□□□ 0.2
Lhx3P50481 Gm9172-201ENSMUST00000212092 954 ntBASIC16.32■□□□□ 0.2
Lhx3P50481 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.32■□□□□ 0.2
Lhx3P50481 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx3P50481 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx3P50481 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx3P50481 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx3P50481 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx3P50481 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx3P50481 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx3P50481 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx3P50481 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx3P50481 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
Lhx3P50481 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx3P50481 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx3P50481 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx3P50481 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx3P50481 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx3P50481 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx3P50481 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx3P50481 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Lhx3P50481 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.31■□□□□ 0.2
Lhx3P50481 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx3P50481 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx3P50481 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Lhx3P50481 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx3P50481 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx3P50481 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx3P50481 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx3P50481 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Lhx3P50481 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx3P50481 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.31■□□□□ 0.2
Lhx3P50481 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Lhx3P50481 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx3P50481 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx3P50481 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx3P50481 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx3P50481 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx3P50481 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx3P50481 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx3P50481 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx3P50481 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx3P50481 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.31■□□□□ 0.2
Lhx3P50481 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.3■□□□□ 0.2
Lhx3P50481 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx3P50481 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx3P50481 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx3P50481 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx3P50481 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Lhx3P50481 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx3P50481 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx3P50481 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx3P50481 Gm4459-201ENSMUST00000118750 468 ntBASIC16.3■□□□□ 0.2
Lhx3P50481 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx3P50481 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.3■□□□□ 0.2
Lhx3P50481 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.3■□□□□ 0.2
Lhx3P50481 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.3■□□□□ 0.2
Lhx3P50481 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx3P50481 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Lhx3P50481 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx3P50481 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.3■□□□□ 0.2
Lhx3P50481 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.3■□□□□ 0.2
Lhx3P50481 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx3P50481 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.3■□□□□ 0.2
Lhx3P50481 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.3■□□□□ 0.2
Lhx3P50481 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx3P50481 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx3P50481 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.29■□□□□ 0.2
Lhx3P50481 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx3P50481 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx3P50481 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx3P50481 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx3P50481 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx3P50481 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx3P50481 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx3P50481 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx3P50481 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx3P50481 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx3P50481 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx3P50481 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx3P50481 Gm12497-201ENSMUST00000138778 237 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms