Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Brca1P48754 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18■□□□□ 0.47
Brca1P48754 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Brca1P48754 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Brca1P48754 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Brca1P48754 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Brca1P48754 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Brca1P48754 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Brca1P48754 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Brca1P48754 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.99■□□□□ 0.47
Brca1P48754 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Brca1P48754 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Brca1P48754 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Brca1P48754 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC17.99■□□□□ 0.47
Brca1P48754 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.99■□□□□ 0.47
Brca1P48754 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
Brca1P48754 AC126408.1-201ENSMUST00000225184 523 ntBASIC17.99■□□□□ 0.47
Brca1P48754 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Brca1P48754 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Brca1P48754 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Brca1P48754 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Brca1P48754 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.99■□□□□ 0.47
Brca1P48754 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Brca1P48754 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Brca1P48754 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Brca1P48754 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Brca1P48754 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Brca1P48754 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.98■□□□□ 0.47
Brca1P48754 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Brca1P48754 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.98■□□□□ 0.47
Brca1P48754 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC17.98■□□□□ 0.47
Brca1P48754 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.98■□□□□ 0.47
Brca1P48754 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Brca1P48754 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.98■□□□□ 0.47
Brca1P48754 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.98■□□□□ 0.47
Brca1P48754 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Brca1P48754 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Brca1P48754 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Brca1P48754 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Brca1P48754 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.98■□□□□ 0.47
Brca1P48754 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.98■□□□□ 0.47
Brca1P48754 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.98■□□□□ 0.47
Brca1P48754 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.98■□□□□ 0.47
Brca1P48754 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Brca1P48754 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.98■□□□□ 0.47
Brca1P48754 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.98■□□□□ 0.47
Brca1P48754 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Brca1P48754 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Brca1P48754 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Brca1P48754 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Brca1P48754 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
Brca1P48754 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Brca1P48754 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Brca1P48754 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.97■□□□□ 0.47
Brca1P48754 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Brca1P48754 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Brca1P48754 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Brca1P48754 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Brca1P48754 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.97■□□□□ 0.47
Brca1P48754 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.97■□□□□ 0.47
Brca1P48754 Gm18246-201ENSMUST00000221023 728 ntBASIC17.97■□□□□ 0.47
Brca1P48754 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Brca1P48754 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Brca1P48754 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Brca1P48754 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Brca1P48754 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Brca1P48754 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Brca1P48754 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Brca1P48754 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Brca1P48754 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Brca1P48754 Fgf17-202ENSMUST00000227123 1336 ntBASIC17.96■□□□□ 0.47
Brca1P48754 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Brca1P48754 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Brca1P48754 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.96■□□□□ 0.47
Brca1P48754 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Brca1P48754 Gm43767-201ENSMUST00000198933 381 ntBASIC17.96■□□□□ 0.47
Brca1P48754 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Brca1P48754 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Brca1P48754 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Brca1P48754 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Brca1P48754 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.96■□□□□ 0.47
Brca1P48754 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Brca1P48754 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Brca1P48754 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Brca1P48754 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Brca1P48754 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Brca1P48754 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Brca1P48754 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
Brca1P48754 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
Brca1P48754 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Brca1P48754 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Brca1P48754 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Brca1P48754 Rprl2-201ENSMUST00000157150 290 ntBASIC17.95■□□□□ 0.46
Brca1P48754 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Brca1P48754 Gm19164-201ENSMUST00000210667 640 ntBASIC17.95■□□□□ 0.46
Brca1P48754 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Brca1P48754 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Brca1P48754 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Brca1P48754 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Brca1P48754 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms