Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GdnfP48540 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
GdnfP48540 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
GdnfP48540 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GdnfP48540 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GdnfP48540 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GdnfP48540 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GdnfP48540 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GdnfP48540 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GdnfP48540 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.15□□□□□ -0.14
GdnfP48540 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GdnfP48540 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.15□□□□□ -0.14
GdnfP48540 Mir6982-201ENSMUST00000184354 68 ntBASIC14.15□□□□□ -0.14
GdnfP48540 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GdnfP48540 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GdnfP48540 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GdnfP48540 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GdnfP48540 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GdnfP48540 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GdnfP48540 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
GdnfP48540 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GdnfP48540 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GdnfP48540 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
GdnfP48540 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GdnfP48540 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GdnfP48540 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GdnfP48540 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GdnfP48540 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GdnfP48540 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GdnfP48540 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
GdnfP48540 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
GdnfP48540 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.15□□□□□ -0.15
GdnfP48540 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GdnfP48540 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GdnfP48540 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GdnfP48540 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GdnfP48540 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
GdnfP48540 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
GdnfP48540 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GdnfP48540 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.14□□□□□ -0.15
GdnfP48540 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.14□□□□□ -0.15
GdnfP48540 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GdnfP48540 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GdnfP48540 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GdnfP48540 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GdnfP48540 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.14□□□□□ -0.15
GdnfP48540 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.14□□□□□ -0.15
GdnfP48540 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.14□□□□□ -0.15
GdnfP48540 Gm30025-201ENSMUST00000218555 728 ntBASIC14.14□□□□□ -0.15
GdnfP48540 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.14□□□□□ -0.15
GdnfP48540 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GdnfP48540 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GdnfP48540 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
GdnfP48540 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GdnfP48540 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GdnfP48540 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GdnfP48540 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GdnfP48540 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GdnfP48540 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GdnfP48540 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
GdnfP48540 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GdnfP48540 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GdnfP48540 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GdnfP48540 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.14□□□□□ -0.15
GdnfP48540 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GdnfP48540 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
GdnfP48540 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GdnfP48540 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GdnfP48540 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GdnfP48540 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GdnfP48540 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GdnfP48540 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GdnfP48540 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GdnfP48540 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GdnfP48540 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.13□□□□□ -0.15
GdnfP48540 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.13□□□□□ -0.15
GdnfP48540 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.13□□□□□ -0.15
GdnfP48540 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.13□□□□□ -0.15
GdnfP48540 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GdnfP48540 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GdnfP48540 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GdnfP48540 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
GdnfP48540 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
GdnfP48540 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GdnfP48540 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GdnfP48540 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GdnfP48540 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GdnfP48540 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GdnfP48540 Asic1-205ENSMUST00000228185 1818 ntBASIC14.13□□□□□ -0.15
GdnfP48540 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GdnfP48540 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GdnfP48540 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GdnfP48540 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GdnfP48540 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
GdnfP48540 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GdnfP48540 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GdnfP48540 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.12□□□□□ -0.15
GdnfP48540 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GdnfP48540 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GdnfP48540 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms