Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sox2P48432 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Sox2P48432 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Sox2P48432 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox2P48432 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sox2P48432 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sox2P48432 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox2P48432 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sox2P48432 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sox2P48432 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.15■□□□□ 0.02
Sox2P48432 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sox2P48432 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.15■□□□□ 0.02
Sox2P48432 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.15■□□□□ 0.02
Sox2P48432 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox2P48432 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.15■□□□□ 0.02
Sox2P48432 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.15■□□□□ 0.02
Sox2P48432 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sox2P48432 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sox2P48432 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox2P48432 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox2P48432 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sox2P48432 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox2P48432 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox2P48432 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sox2P48432 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sox2P48432 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sox2P48432 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox2P48432 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox2P48432 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sox2P48432 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox2P48432 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox2P48432 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.14■□□□□ 0.01
Sox2P48432 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox2P48432 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox2P48432 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox2P48432 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Sox2P48432 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.14■□□□□ 0.01
Sox2P48432 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox2P48432 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox2P48432 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox2P48432 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.14■□□□□ 0.01
Sox2P48432 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.14■□□□□ 0.01
Sox2P48432 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox2P48432 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox2P48432 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox2P48432 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox2P48432 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox2P48432 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Sox2P48432 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox2P48432 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox2P48432 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox2P48432 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.14■□□□□ 0.01
Sox2P48432 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Sox2P48432 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox2P48432 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sox2P48432 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox2P48432 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox2P48432 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sox2P48432 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sox2P48432 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox2P48432 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox2P48432 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sox2P48432 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Sox2P48432 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox2P48432 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sox2P48432 Phf7-203ENSMUST00000226565 1971 ntBASIC15.13■□□□□ 0.01
Sox2P48432 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox2P48432 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Sox2P48432 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.13■□□□□ 0.01
Sox2P48432 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sox2P48432 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sox2P48432 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.13■□□□□ 0.01
Sox2P48432 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox2P48432 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.13■□□□□ 0.01
Sox2P48432 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.13■□□□□ 0.01
Sox2P48432 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.13■□□□□ 0.01
Sox2P48432 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox2P48432 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox2P48432 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox2P48432 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Sox2P48432 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Sox2P48432 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.13■□□□□ 0.01
Sox2P48432 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.13■□□□□ 0.01
Sox2P48432 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sox2P48432 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Sox2P48432 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Sox2P48432 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox2P48432 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox2P48432 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox2P48432 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sox2P48432 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Sox2P48432 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sox2P48432 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox2P48432 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox2P48432 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox2P48432 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sox2P48432 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox2P48432 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox2P48432 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Sox2P48432 Gm13186-201ENSMUST00000118031 316 ntBASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms