Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rfx3P48381 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rfx3P48381 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Rfx3P48381 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rfx3P48381 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rfx3P48381 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rfx3P48381 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Rfx3P48381 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Rfx3P48381 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx3P48381 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx3P48381 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx3P48381 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx3P48381 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx3P48381 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx3P48381 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.59□□□□□ -0.07
Rfx3P48381 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx3P48381 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx3P48381 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx3P48381 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx3P48381 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Rfx3P48381 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx3P48381 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx3P48381 Gm13559-201ENSMUST00000120476 863 ntBASIC14.59□□□□□ -0.07
Rfx3P48381 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.59□□□□□ -0.07
Rfx3P48381 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx3P48381 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx3P48381 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx3P48381 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx3P48381 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx3P48381 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx3P48381 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.59□□□□□ -0.07
Rfx3P48381 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx3P48381 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx3P48381 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx3P48381 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx3P48381 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx3P48381 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx3P48381 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx3P48381 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx3P48381 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx3P48381 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx3P48381 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Rfx3P48381 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Rfx3P48381 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rfx3P48381 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Rfx3P48381 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfx3P48381 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfx3P48381 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfx3P48381 Gm13836-201ENSMUST00000121159 501 ntBASIC14.58□□□□□ -0.08
Rfx3P48381 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.58□□□□□ -0.08
Rfx3P48381 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.58□□□□□ -0.08
Rfx3P48381 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfx3P48381 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfx3P48381 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfx3P48381 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rfx3P48381 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rfx3P48381 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfx3P48381 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfx3P48381 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.57□□□□□ -0.08
Rfx3P48381 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rfx3P48381 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfx3P48381 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Rfx3P48381 Actl10-202ENSMUST00000226583 1501 ntBASIC14.57□□□□□ -0.08
Rfx3P48381 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfx3P48381 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rfx3P48381 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rfx3P48381 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Rfx3P48381 Phf7-203ENSMUST00000226565 1971 ntBASIC14.57□□□□□ -0.08
Rfx3P48381 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Rfx3P48381 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rfx3P48381 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Rfx3P48381 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.57□□□□□ -0.08
Rfx3P48381 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.57□□□□□ -0.08
Rfx3P48381 Gm7213-201ENSMUST00000215977 950 ntBASIC14.57□□□□□ -0.08
Rfx3P48381 Gm18115-201ENSMUST00000221209 621 ntBASIC14.57□□□□□ -0.08
Rfx3P48381 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Rfx3P48381 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfx3P48381 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfx3P48381 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.57□□□□□ -0.08
Rfx3P48381 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfx3P48381 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfx3P48381 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.56□□□□□ -0.08
Rfx3P48381 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx3P48381 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.56□□□□□ -0.08
Rfx3P48381 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx3P48381 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx3P48381 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx3P48381 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx3P48381 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx3P48381 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Rfx3P48381 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx3P48381 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx3P48381 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx3P48381 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx3P48381 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx3P48381 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx3P48381 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx3P48381 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx3P48381 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx3P48381 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms