Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC10.54□□□□□ -0.72
Xcl1P47993 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Xcl1P47993 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Xcl1P47993 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Xcl1P47993 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Xcl1P47993 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Xcl1P47993 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Xcl1P47993 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Xcl1P47993 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Xcl1P47993 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Xcl1P47993 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Xcl1P47993 Gm45133-201ENSMUST00000207548 2773 ntBASIC10.54□□□□□ -0.72
Xcl1P47993 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Xcl1P47993 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Xcl1P47993 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC10.54□□□□□ -0.72
Xcl1P47993 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Xcl1P47993 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Xcl1P47993 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
Xcl1P47993 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Xcl1P47993 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Xcl1P47993 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Xcl1P47993 CT025610.1-201ENSMUST00000224552 1786 ntBASIC10.54□□□□□ -0.72
Xcl1P47993 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Xcl1P47993 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Xcl1P47993 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Xcl1P47993 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Xcl1P47993 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Xcl1P47993 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Xcl1P47993 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xcl1P47993 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xcl1P47993 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xcl1P47993 Gm42901-201ENSMUST00000197735 3171 ntBASIC10.53□□□□□ -0.72
Xcl1P47993 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xcl1P47993 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xcl1P47993 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xcl1P47993 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Xcl1P47993 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xcl1P47993 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xcl1P47993 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xcl1P47993 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Xcl1P47993 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Xcl1P47993 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Xcl1P47993 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xcl1P47993 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xcl1P47993 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Xcl1P47993 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xcl1P47993 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xcl1P47993 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xcl1P47993 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC10.53□□□□□ -0.72
Xcl1P47993 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Xcl1P47993 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC10.53□□□□□ -0.72
Xcl1P47993 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xcl1P47993 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xcl1P47993 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
Xcl1P47993 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xcl1P47993 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xcl1P47993 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Xcl1P47993 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xcl1P47993 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Xcl1P47993 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Xcl1P47993 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xcl1P47993 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xcl1P47993 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC10.53□□□□□ -0.72
Xcl1P47993 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xcl1P47993 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC10.53□□□□□ -0.72
Xcl1P47993 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xcl1P47993 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xcl1P47993 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xcl1P47993 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xcl1P47993 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Xcl1P47993 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Xcl1P47993 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Xcl1P47993 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Xcl1P47993 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Xcl1P47993 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Xcl1P47993 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Xcl1P47993 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Xcl1P47993 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Xcl1P47993 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Xcl1P47993 Phf7-203ENSMUST00000226565 1971 ntBASIC10.52□□□□□ -0.72
Xcl1P47993 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC10.52□□□□□ -0.72
Xcl1P47993 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Xcl1P47993 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC10.52□□□□□ -0.72
Xcl1P47993 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Xcl1P47993 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Xcl1P47993 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Xcl1P47993 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Xcl1P47993 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Xcl1P47993 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Xcl1P47993 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Xcl1P47993 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Xcl1P47993 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC10.52□□□□□ -0.73
Xcl1P47993 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC10.52□□□□□ -0.73
Xcl1P47993 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC10.52□□□□□ -0.73
Xcl1P47993 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Xcl1P47993 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Xcl1P47993 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Xcl1P47993 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
Xcl1P47993 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Xcl1P47993 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms