Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4bP46467 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Vps4bP46467 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4bP46467 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4bP46467 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4bP46467 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.38■□□□□ 0.21
Vps4bP46467 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.38■□□□□ 0.21
Vps4bP46467 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.38■□□□□ 0.21
Vps4bP46467 Gm45058-201ENSMUST00000205810 766 ntBASIC16.38■□□□□ 0.21
Vps4bP46467 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.38■□□□□ 0.21
Vps4bP46467 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4bP46467 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4bP46467 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4bP46467 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4bP46467 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4bP46467 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4bP46467 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Vps4bP46467 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4bP46467 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4bP46467 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4bP46467 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.38■□□□□ 0.21
Vps4bP46467 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.38■□□□□ 0.21
Vps4bP46467 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4bP46467 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vps4bP46467 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps4bP46467 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps4bP46467 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.37■□□□□ 0.21
Vps4bP46467 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps4bP46467 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vps4bP46467 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps4bP46467 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps4bP46467 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps4bP46467 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps4bP46467 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.37■□□□□ 0.21
Vps4bP46467 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps4bP46467 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.37■□□□□ 0.21
Vps4bP46467 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Vps4bP46467 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.37■□□□□ 0.21
Vps4bP46467 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Vps4bP46467 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps4bP46467 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Vps4bP46467 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Vps4bP46467 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps4bP46467 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps4bP46467 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vps4bP46467 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps4bP46467 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vps4bP46467 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps4bP46467 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps4bP46467 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vps4bP46467 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vps4bP46467 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps4bP46467 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vps4bP46467 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.36■□□□□ 0.21
Vps4bP46467 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps4bP46467 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.36■□□□□ 0.21
Vps4bP46467 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps4bP46467 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.36■□□□□ 0.21
Vps4bP46467 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Vps4bP46467 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vps4bP46467 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.36■□□□□ 0.21
Vps4bP46467 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vps4bP46467 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps4bP46467 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps4bP46467 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps4bP46467 Gm18959-201ENSMUST00000208954 655 ntBASIC16.36■□□□□ 0.21
Vps4bP46467 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps4bP46467 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vps4bP46467 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps4bP46467 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Vps4bP46467 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps4bP46467 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps4bP46467 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vps4bP46467 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps4bP46467 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps4bP46467 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps4bP46467 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Vps4bP46467 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vps4bP46467 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps4bP46467 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps4bP46467 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.35■□□□□ 0.21
Vps4bP46467 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Vps4bP46467 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps4bP46467 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.35■□□□□ 0.21
Vps4bP46467 Gm27741-201ENSMUST00000185060 237 ntBASIC16.35■□□□□ 0.21
Vps4bP46467 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vps4bP46467 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps4bP46467 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps4bP46467 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps4bP46467 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps4bP46467 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps4bP46467 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.35■□□□□ 0.21
Vps4bP46467 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps4bP46467 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.35■□□□□ 0.21
Vps4bP46467 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps4bP46467 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps4bP46467 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vps4bP46467 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vps4bP46467 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps4bP46467 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms