Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdx2P43241 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.27■□□□□ 0.04
Cdx2P43241 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdx2P43241 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.27■□□□□ 0.04
Cdx2P43241 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdx2P43241 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Cdx2P43241 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cdx2P43241 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Cdx2P43241 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cdx2P43241 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdx2P43241 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cdx2P43241 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdx2P43241 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.27■□□□□ 0.04
Cdx2P43241 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.27■□□□□ 0.04
Cdx2P43241 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.27■□□□□ 0.04
Cdx2P43241 Chchd1-203ENSMUST00000224633 557 ntBASIC15.27■□□□□ 0.04
Cdx2P43241 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdx2P43241 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cdx2P43241 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.27■□□□□ 0.04
Cdx2P43241 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Cdx2P43241 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdx2P43241 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cdx2P43241 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.27■□□□□ 0.03
Cdx2P43241 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdx2P43241 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdx2P43241 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cdx2P43241 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdx2P43241 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdx2P43241 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.27■□□□□ 0.03
Cdx2P43241 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdx2P43241 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.26■□□□□ 0.03
Cdx2P43241 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdx2P43241 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdx2P43241 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdx2P43241 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdx2P43241 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdx2P43241 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdx2P43241 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdx2P43241 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Cdx2P43241 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdx2P43241 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Cdx2P43241 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.26■□□□□ 0.03
Cdx2P43241 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdx2P43241 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdx2P43241 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdx2P43241 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdx2P43241 Auts2-212ENSMUST00000178555 309 ntBASIC15.26■□□□□ 0.03
Cdx2P43241 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdx2P43241 Gm7063-201ENSMUST00000186840 981 ntBASIC15.26■□□□□ 0.03
Cdx2P43241 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.26■□□□□ 0.03
Cdx2P43241 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cdx2P43241 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdx2P43241 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdx2P43241 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdx2P43241 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdx2P43241 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdx2P43241 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cdx2P43241 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdx2P43241 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cdx2P43241 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdx2P43241 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdx2P43241 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.25■□□□□ 0.03
Cdx2P43241 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdx2P43241 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdx2P43241 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdx2P43241 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdx2P43241 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdx2P43241 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdx2P43241 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdx2P43241 Gm27300-201ENSMUST00000184085 97 ntBASIC15.25■□□□□ 0.03
Cdx2P43241 Gm27335-201ENSMUST00000184758 97 ntBASIC15.25■□□□□ 0.03
Cdx2P43241 Gm37153-201ENSMUST00000193637 231 ntBASIC15.25■□□□□ 0.03
Cdx2P43241 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdx2P43241 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdx2P43241 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdx2P43241 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.25■□□□□ 0.03
Cdx2P43241 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdx2P43241 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdx2P43241 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdx2P43241 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdx2P43241 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.25■□□□□ 0.03
Cdx2P43241 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdx2P43241 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdx2P43241 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdx2P43241 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cdx2P43241 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdx2P43241 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdx2P43241 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdx2P43241 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdx2P43241 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdx2P43241 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdx2P43241 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdx2P43241 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdx2P43241 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdx2P43241 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.24■□□□□ 0.03
Cdx2P43241 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdx2P43241 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdx2P43241 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Cdx2P43241 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdx2P43241 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms