Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hmx3P42581 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.52□□□□□ -0.24
Hmx3P42581 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hmx3P42581 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.52□□□□□ -0.24
Hmx3P42581 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hmx3P42581 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hmx3P42581 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmx3P42581 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Hmx3P42581 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.52□□□□□ -0.25
Hmx3P42581 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmx3P42581 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmx3P42581 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmx3P42581 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.52□□□□□ -0.25
Hmx3P42581 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmx3P42581 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmx3P42581 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hmx3P42581 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Hmx3P42581 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmx3P42581 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmx3P42581 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Hmx3P42581 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmx3P42581 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmx3P42581 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hmx3P42581 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmx3P42581 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmx3P42581 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmx3P42581 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hmx3P42581 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hmx3P42581 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.51□□□□□ -0.25
Hmx3P42581 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmx3P42581 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Hmx3P42581 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmx3P42581 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.51□□□□□ -0.25
Hmx3P42581 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmx3P42581 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmx3P42581 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmx3P42581 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmx3P42581 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hmx3P42581 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.51□□□□□ -0.25
Hmx3P42581 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.51□□□□□ -0.25
Hmx3P42581 Gm10653-202ENSMUST00000139570 835 ntBASIC13.51□□□□□ -0.25
Hmx3P42581 Gm43183-201ENSMUST00000200632 547 ntBASIC13.51□□□□□ -0.25
Hmx3P42581 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.51□□□□□ -0.25
Hmx3P42581 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.51□□□□□ -0.25
Hmx3P42581 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmx3P42581 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmx3P42581 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Hmx3P42581 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmx3P42581 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmx3P42581 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmx3P42581 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmx3P42581 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmx3P42581 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmx3P42581 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Hmx3P42581 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmx3P42581 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmx3P42581 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmx3P42581 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.51□□□□□ -0.25
Hmx3P42581 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.5□□□□□ -0.25
Hmx3P42581 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmx3P42581 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmx3P42581 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmx3P42581 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Hmx3P42581 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmx3P42581 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Hmx3P42581 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmx3P42581 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmx3P42581 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmx3P42581 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.5□□□□□ -0.25
Hmx3P42581 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmx3P42581 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmx3P42581 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.5□□□□□ -0.25
Hmx3P42581 Gm5643-201ENSMUST00000117081 966 ntBASIC13.5□□□□□ -0.25
Hmx3P42581 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.5□□□□□ -0.25
Hmx3P42581 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hmx3P42581 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmx3P42581 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmx3P42581 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmx3P42581 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Hmx3P42581 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Hmx3P42581 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmx3P42581 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.5□□□□□ -0.25
Hmx3P42581 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmx3P42581 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmx3P42581 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmx3P42581 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.5□□□□□ -0.25
Hmx3P42581 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmx3P42581 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmx3P42581 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmx3P42581 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hmx3P42581 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmx3P42581 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hmx3P42581 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmx3P42581 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.49□□□□□ -0.25
Hmx3P42581 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmx3P42581 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hmx3P42581 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmx3P42581 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13.49□□□□□ -0.25
Hmx3P42581 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmx3P42581 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms