Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Timp3P39876 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Timp3P39876 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Timp3P39876 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Timp3P39876 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Timp3P39876 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Timp3P39876 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.21□□□□□ -0.29
Timp3P39876 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.21□□□□□ -0.29
Timp3P39876 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Timp3P39876 Gm18421-201ENSMUST00000204122 625 ntBASIC13.21□□□□□ -0.29
Timp3P39876 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Timp3P39876 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Timp3P39876 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Timp3P39876 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Timp3P39876 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Timp3P39876 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Timp3P39876 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Timp3P39876 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Timp3P39876 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Timp3P39876 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Timp3P39876 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Timp3P39876 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Timp3P39876 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Timp3P39876 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Timp3P39876 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Timp3P39876 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Timp3P39876 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Timp3P39876 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Timp3P39876 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Timp3P39876 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Timp3P39876 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Timp3P39876 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Timp3P39876 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Timp3P39876 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Timp3P39876 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.2□□□□□ -0.3
Timp3P39876 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Timp3P39876 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Timp3P39876 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Timp3P39876 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Timp3P39876 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Timp3P39876 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Timp3P39876 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Timp3P39876 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Timp3P39876 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Timp3P39876 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Timp3P39876 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Timp3P39876 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.19□□□□□ -0.3
Timp3P39876 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Timp3P39876 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Timp3P39876 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Timp3P39876 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Timp3P39876 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Timp3P39876 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Timp3P39876 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Timp3P39876 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Timp3P39876 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Timp3P39876 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Timp3P39876 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Timp3P39876 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Timp3P39876 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Timp3P39876 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Timp3P39876 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Timp3P39876 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Timp3P39876 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.19□□□□□ -0.3
Timp3P39876 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Timp3P39876 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Timp3P39876 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.19□□□□□ -0.3
Timp3P39876 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Timp3P39876 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.19□□□□□ -0.3
Timp3P39876 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.19□□□□□ -0.3
Timp3P39876 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Timp3P39876 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.19□□□□□ -0.3
Timp3P39876 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Timp3P39876 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Timp3P39876 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Timp3P39876 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Timp3P39876 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Timp3P39876 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Timp3P39876 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Timp3P39876 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Timp3P39876 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Timp3P39876 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.19□□□□□ -0.3
Timp3P39876 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Timp3P39876 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Timp3P39876 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Timp3P39876 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Timp3P39876 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Timp3P39876 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Timp3P39876 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Timp3P39876 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Timp3P39876 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Timp3P39876 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Timp3P39876 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Timp3P39876 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.18□□□□□ -0.3
Timp3P39876 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.18□□□□□ -0.3
Timp3P39876 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Timp3P39876 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.18□□□□□ -0.3
Timp3P39876 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Timp3P39876 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Timp3P39876 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms