Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rfc1P35601 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC17.06■□□□□ 0.32
Rfc1P35601 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.05■□□□□ 0.32
Rfc1P35601 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Rfc1P35601 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfc1P35601 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC17.05■□□□□ 0.32
Rfc1P35601 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfc1P35601 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Rfc1P35601 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfc1P35601 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfc1P35601 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rfc1P35601 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rfc1P35601 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rfc1P35601 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rfc1P35601 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.05■□□□□ 0.32
Rfc1P35601 Gm42545-201ENSMUST00000202755 922 ntBASIC17.05■□□□□ 0.32
Rfc1P35601 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.05■□□□□ 0.32
Rfc1P35601 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfc1P35601 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfc1P35601 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfc1P35601 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfc1P35601 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rfc1P35601 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfc1P35601 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfc1P35601 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfc1P35601 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rfc1P35601 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfc1P35601 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfc1P35601 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfc1P35601 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rfc1P35601 Gm10710-201ENSMUST00000047876 3971 ntBASIC17.04■□□□□ 0.32
Rfc1P35601 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.04■□□□□ 0.32
Rfc1P35601 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfc1P35601 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.04■□□□□ 0.32
Rfc1P35601 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfc1P35601 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfc1P35601 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.04■□□□□ 0.32
Rfc1P35601 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.04■□□□□ 0.32
Rfc1P35601 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfc1P35601 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfc1P35601 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfc1P35601 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfc1P35601 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC17.04■□□□□ 0.32
Rfc1P35601 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.04■□□□□ 0.32
Rfc1P35601 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Rfc1P35601 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfc1P35601 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfc1P35601 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.04■□□□□ 0.32
Rfc1P35601 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfc1P35601 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rfc1P35601 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.04■□□□□ 0.32
Rfc1P35601 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfc1P35601 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfc1P35601 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfc1P35601 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Rfc1P35601 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfc1P35601 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rfc1P35601 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Rfc1P35601 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfc1P35601 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfc1P35601 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rfc1P35601 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.03■□□□□ 0.32
Rfc1P35601 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfc1P35601 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfc1P35601 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.03■□□□□ 0.32
Rfc1P35601 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfc1P35601 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.02■□□□□ 0.32
Rfc1P35601 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfc1P35601 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfc1P35601 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfc1P35601 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rfc1P35601 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Rfc1P35601 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfc1P35601 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Rfc1P35601 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Rfc1P35601 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfc1P35601 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rfc1P35601 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.02■□□□□ 0.32
Rfc1P35601 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.02■□□□□ 0.32
Rfc1P35601 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.02■□□□□ 0.32
Rfc1P35601 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rfc1P35601 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Rfc1P35601 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rfc1P35601 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.02■□□□□ 0.31
Rfc1P35601 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rfc1P35601 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rfc1P35601 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rfc1P35601 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Rfc1P35601 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfc1P35601 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfc1P35601 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfc1P35601 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rfc1P35601 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfc1P35601 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfc1P35601 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rfc1P35601 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rfc1P35601 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.01■□□□□ 0.31
Rfc1P35601 Gm37292-201ENSMUST00000192062 758 ntBASIC17.01■□□□□ 0.31
Rfc1P35601 Gm4974-201ENSMUST00000209974 875 ntBASIC17.01■□□□□ 0.31
Rfc1P35601 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms