Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab5cP35278 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab5cP35278 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Rab5cP35278 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab5cP35278 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rab5cP35278 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rab5cP35278 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rab5cP35278 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rab5cP35278 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.3
Rab5cP35278 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rab5cP35278 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rab5cP35278 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Rab5cP35278 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rab5cP35278 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rab5cP35278 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rab5cP35278 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rab5cP35278 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rab5cP35278 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rab5cP35278 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.21□□□□□ -0.3
Rab5cP35278 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.2□□□□□ -0.3
Rab5cP35278 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rab5cP35278 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab5cP35278 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Rab5cP35278 Sybu-209ENSMUST00000228639 4113 ntBASIC13.2□□□□□ -0.3
Rab5cP35278 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab5cP35278 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rab5cP35278 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC13.2□□□□□ -0.3
Rab5cP35278 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC13.2□□□□□ -0.3
Rab5cP35278 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rab5cP35278 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab5cP35278 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab5cP35278 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Rab5cP35278 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab5cP35278 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab5cP35278 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab5cP35278 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rab5cP35278 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.2□□□□□ -0.3
Rab5cP35278 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab5cP35278 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rab5cP35278 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rab5cP35278 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Rab5cP35278 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rab5cP35278 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab5cP35278 Gm13509-201ENSMUST00000119733 1308 ntBASIC13.19□□□□□ -0.3
Rab5cP35278 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab5cP35278 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab5cP35278 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab5cP35278 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Rab5cP35278 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rab5cP35278 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Rab5cP35278 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab5cP35278 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab5cP35278 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.19□□□□□ -0.3
Rab5cP35278 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Rab5cP35278 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab5cP35278 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rab5cP35278 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab5cP35278 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Rab5cP35278 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab5cP35278 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab5cP35278 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab5cP35278 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab5cP35278 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab5cP35278 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.19□□□□□ -0.3
Rab5cP35278 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rab5cP35278 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab5cP35278 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab5cP35278 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.18□□□□□ -0.3
Rab5cP35278 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab5cP35278 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab5cP35278 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab5cP35278 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab5cP35278 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab5cP35278 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab5cP35278 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rab5cP35278 Gm6576-201ENSMUST00000169678 883 ntBASIC13.18□□□□□ -0.3
Rab5cP35278 Gm45417-201ENSMUST00000209533 758 ntBASIC13.18□□□□□ -0.3
Rab5cP35278 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC13.18□□□□□ -0.3
Rab5cP35278 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab5cP35278 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Rab5cP35278 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rab5cP35278 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rab5cP35278 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab5cP35278 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab5cP35278 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rab5cP35278 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab5cP35278 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab5cP35278 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab5cP35278 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab5cP35278 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab5cP35278 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab5cP35278 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.17□□□□□ -0.3
Rab5cP35278 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab5cP35278 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC13.17□□□□□ -0.3
Rab5cP35278 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab5cP35278 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab5cP35278 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab5cP35278 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.17□□□□□ -0.3
Rab5cP35278 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab5cP35278 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms