Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40lgP27548 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40lgP27548 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.88□□□□□ -0.03
Cd40lgP27548 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40lgP27548 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40lgP27548 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.88□□□□□ -0.03
Cd40lgP27548 Gm7284-201ENSMUST00000131667 944 ntBASIC14.88□□□□□ -0.03
Cd40lgP27548 Gm29707-201ENSMUST00000196325 491 ntBASIC14.88□□□□□ -0.03
Cd40lgP27548 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40lgP27548 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40lgP27548 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40lgP27548 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40lgP27548 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cd40lgP27548 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Cd40lgP27548 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40lgP27548 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40lgP27548 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40lgP27548 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40lgP27548 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40lgP27548 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40lgP27548 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.88□□□□□ -0.03
Cd40lgP27548 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40lgP27548 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cd40lgP27548 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40lgP27548 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40lgP27548 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40lgP27548 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cd40lgP27548 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40lgP27548 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40lgP27548 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40lgP27548 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Cd40lgP27548 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Cd40lgP27548 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40lgP27548 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.87□□□□□ -0.03
Cd40lgP27548 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40lgP27548 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40lgP27548 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40lgP27548 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40lgP27548 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.87□□□□□ -0.03
Cd40lgP27548 Gm27704-201ENSMUST00000185094 107 ntBASIC14.87□□□□□ -0.03
Cd40lgP27548 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40lgP27548 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.87□□□□□ -0.03
Cd40lgP27548 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40lgP27548 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40lgP27548 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40lgP27548 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cd40lgP27548 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cd40lgP27548 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.87□□□□□ -0.03
Cd40lgP27548 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40lgP27548 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cd40lgP27548 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cd40lgP27548 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cd40lgP27548 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cd40lgP27548 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cd40lgP27548 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cd40lgP27548 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cd40lgP27548 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cd40lgP27548 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cd40lgP27548 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cd40lgP27548 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cd40lgP27548 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.86□□□□□ -0.03
Cd40lgP27548 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cd40lgP27548 Gm18421-201ENSMUST00000204122 625 ntBASIC14.86□□□□□ -0.03
Cd40lgP27548 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cd40lgP27548 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cd40lgP27548 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cd40lgP27548 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cd40lgP27548 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Cd40lgP27548 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cd40lgP27548 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cd40lgP27548 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cd40lgP27548 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Cd40lgP27548 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40lgP27548 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40lgP27548 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.85□□□□□ -0.03
Cd40lgP27548 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40lgP27548 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40lgP27548 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40lgP27548 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40lgP27548 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40lgP27548 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40lgP27548 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40lgP27548 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40lgP27548 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.85□□□□□ -0.03
Cd40lgP27548 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.85□□□□□ -0.03
Cd40lgP27548 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Cd40lgP27548 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.85□□□□□ -0.03
Cd40lgP27548 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.85□□□□□ -0.03
Cd40lgP27548 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.85□□□□□ -0.03
Cd40lgP27548 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40lgP27548 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40lgP27548 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40lgP27548 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40lgP27548 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40lgP27548 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40lgP27548 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40lgP27548 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40lgP27548 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40lgP27548 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.85□□□□□ -0.03
Cd40lgP27548 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms