Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Nfkb1P25799 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nfkb1P25799 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nfkb1P25799 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nfkb1P25799 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Nfkb1P25799 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nfkb1P25799 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Nfkb1P25799 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.53■□□□□ 0.24
Nfkb1P25799 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.53■□□□□ 0.24
Nfkb1P25799 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nfkb1P25799 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.53■□□□□ 0.24
Nfkb1P25799 Gm6443-201ENSMUST00000203599 874 ntBASIC16.53■□□□□ 0.24
Nfkb1P25799 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.53■□□□□ 0.24
Nfkb1P25799 AW822252-206ENSMUST00000208904 237 ntBASIC16.53■□□□□ 0.24
Nfkb1P25799 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.53■□□□□ 0.24
Nfkb1P25799 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nfkb1P25799 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nfkb1P25799 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.53■□□□□ 0.24
Nfkb1P25799 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nfkb1P25799 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nfkb1P25799 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nfkb1P25799 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.53■□□□□ 0.24
Nfkb1P25799 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nfkb1P25799 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.52■□□□□ 0.24
Nfkb1P25799 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nfkb1P25799 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nfkb1P25799 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nfkb1P25799 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Nfkb1P25799 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nfkb1P25799 Gm2651-201ENSMUST00000203560 838 ntBASIC16.52■□□□□ 0.24
Nfkb1P25799 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
Nfkb1P25799 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.52■□□□□ 0.24
Nfkb1P25799 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Nfkb1P25799 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nfkb1P25799 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nfkb1P25799 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.52■□□□□ 0.23
Nfkb1P25799 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nfkb1P25799 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nfkb1P25799 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nfkb1P25799 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nfkb1P25799 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
Nfkb1P25799 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nfkb1P25799 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nfkb1P25799 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nfkb1P25799 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nfkb1P25799 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nfkb1P25799 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nfkb1P25799 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Nfkb1P25799 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.51■□□□□ 0.23
Nfkb1P25799 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nfkb1P25799 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nfkb1P25799 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nfkb1P25799 Gm13216-201ENSMUST00000117145 591 ntBASIC16.51■□□□□ 0.23
Nfkb1P25799 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nfkb1P25799 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.51■□□□□ 0.23
Nfkb1P25799 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Nfkb1P25799 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nfkb1P25799 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.51■□□□□ 0.23
Nfkb1P25799 Gm43514-201ENSMUST00000198852 424 ntBASIC16.51■□□□□ 0.23
Nfkb1P25799 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nfkb1P25799 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Nfkb1P25799 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nfkb1P25799 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nfkb1P25799 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.51■□□□□ 0.23
Nfkb1P25799 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Nfkb1P25799 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nfkb1P25799 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nfkb1P25799 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nfkb1P25799 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.51■□□□□ 0.23
Nfkb1P25799 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nfkb1P25799 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.5■□□□□ 0.23
Nfkb1P25799 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nfkb1P25799 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Nfkb1P25799 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nfkb1P25799 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nfkb1P25799 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Nfkb1P25799 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.5■□□□□ 0.23
Nfkb1P25799 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nfkb1P25799 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nfkb1P25799 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nfkb1P25799 Mir5131-201ENSMUST00000175426 93 ntBASIC16.5■□□□□ 0.23
Nfkb1P25799 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.5■□□□□ 0.23
Nfkb1P25799 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nfkb1P25799 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.5■□□□□ 0.23
Nfkb1P25799 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.5■□□□□ 0.23
Nfkb1P25799 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nfkb1P25799 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nfkb1P25799 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nfkb1P25799 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nfkb1P25799 Haglr-201ENSMUST00000100000 2085 ntBASIC16.5■□□□□ 0.23
Nfkb1P25799 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nfkb1P25799 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nfkb1P25799 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nfkb1P25799 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.5■□□□□ 0.23
Nfkb1P25799 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nfkb1P25799 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nfkb1P25799 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Nfkb1P25799 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nfkb1P25799 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nfkb1P25799 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms