Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
P20040 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.36□□□□□ -0.11
P20040 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
P20040 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
P20040 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
P20040 Mir1668-201ENSMUST00000184114 107 ntBASIC14.36□□□□□ -0.11
P20040 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P20040 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P20040 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P20040 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
P20040 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
P20040 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P20040 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P20040 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
P20040 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P20040 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
P20040 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
P20040 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P20040 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P20040 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P20040 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P20040 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.35□□□□□ -0.11
P20040 Gm7213-201ENSMUST00000215977 950 ntBASIC14.35□□□□□ -0.11
P20040 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
P20040 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P20040 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P20040 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P20040 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P20040 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
P20040 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.35□□□□□ -0.11
P20040 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P20040 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
P20040 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
P20040 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
P20040 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
P20040 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
P20040 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
P20040 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
P20040 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P20040 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
P20040 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.34□□□□□ -0.11
P20040 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
P20040 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
P20040 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
P20040 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P20040 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
P20040 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P20040 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
P20040 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
P20040 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P20040 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P20040 Gm6659-201ENSMUST00000174752 547 ntBASIC14.34□□□□□ -0.11
P20040 Gm27389-201ENSMUST00000183622 195 ntBASIC14.34□□□□□ -0.11
P20040 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
P20040 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P20040 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
P20040 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
P20040 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P20040 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
P20040 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
P20040 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
P20040 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
P20040 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P20040 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P20040 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
P20040 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
P20040 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.33□□□□□ -0.11
P20040 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
P20040 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
P20040 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.33□□□□□ -0.11
P20040 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
P20040 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
P20040 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
P20040 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
P20040 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.33□□□□□ -0.11
P20040 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P20040 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P20040 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P20040 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.33□□□□□ -0.12
P20040 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
P20040 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
P20040 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P20040 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
P20040 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
P20040 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P20040 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.33□□□□□ -0.12
P20040 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.33□□□□□ -0.12
P20040 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P20040 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
P20040 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
P20040 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P20040 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
P20040 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P20040 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P20040 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
P20040 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P20040 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P20040 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
P20040 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
P20040 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms