Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sdc1P18828 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sdc1P18828 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sdc1P18828 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sdc1P18828 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sdc1P18828 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sdc1P18828 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sdc1P18828 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sdc1P18828 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.31□□□□□ -0.28
Sdc1P18828 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.31□□□□□ -0.28
Sdc1P18828 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sdc1P18828 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc1P18828 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc1P18828 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc1P18828 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc1P18828 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc1P18828 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc1P18828 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc1P18828 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc1P18828 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc1P18828 Gm45417-201ENSMUST00000209533 758 ntBASIC13.3□□□□□ -0.28
Sdc1P18828 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Sdc1P18828 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC13.3□□□□□ -0.28
Sdc1P18828 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc1P18828 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc1P18828 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc1P18828 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc1P18828 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc1P18828 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc1P18828 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc1P18828 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc1P18828 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.3□□□□□ -0.28
Sdc1P18828 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Sdc1P18828 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.3□□□□□ -0.28
Sdc1P18828 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc1P18828 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc1P18828 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc1P18828 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc1P18828 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc1P18828 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc1P18828 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc1P18828 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc1P18828 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sdc1P18828 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Sdc1P18828 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Sdc1P18828 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sdc1P18828 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.29□□□□□ -0.28
Sdc1P18828 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sdc1P18828 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Sdc1P18828 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.29□□□□□ -0.28
Sdc1P18828 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sdc1P18828 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sdc1P18828 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.29□□□□□ -0.28
Sdc1P18828 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Sdc1P18828 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sdc1P18828 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sdc1P18828 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sdc1P18828 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sdc1P18828 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Sdc1P18828 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Sdc1P18828 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sdc1P18828 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC13.29□□□□□ -0.28
Sdc1P18828 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.29□□□□□ -0.28
Sdc1P18828 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.28□□□□□ -0.28
Sdc1P18828 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc1P18828 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc1P18828 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc1P18828 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc1P18828 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc1P18828 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc1P18828 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc1P18828 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc1P18828 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc1P18828 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc1P18828 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc1P18828 Mir6349-201ENSMUST00000184059 97 ntBASIC13.28□□□□□ -0.28
Sdc1P18828 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC13.28□□□□□ -0.28
Sdc1P18828 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC13.28□□□□□ -0.28
Sdc1P18828 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc1P18828 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc1P18828 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc1P18828 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc1P18828 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc1P18828 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Sdc1P18828 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc1P18828 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc1P18828 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc1P18828 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Sdc1P18828 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc1P18828 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Sdc1P18828 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sdc1P18828 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sdc1P18828 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sdc1P18828 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sdc1P18828 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sdc1P18828 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Sdc1P18828 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Sdc1P18828 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sdc1P18828 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Sdc1P18828 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms