Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgn1P18608 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgn1P18608 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgn1P18608 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgn1P18608 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgn1P18608 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC14.78□□□□□ -0.04
Hmgn1P18608 Mir1199-201ENSMUST00000117015 119 ntBASIC14.78□□□□□ -0.04
Hmgn1P18608 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Hmgn1P18608 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.78□□□□□ -0.04
Hmgn1P18608 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC14.78□□□□□ -0.04
Hmgn1P18608 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgn1P18608 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgn1P18608 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgn1P18608 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgn1P18608 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgn1P18608 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgn1P18608 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgn1P18608 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgn1P18608 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgn1P18608 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgn1P18608 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgn1P18608 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgn1P18608 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgn1P18608 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgn1P18608 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgn1P18608 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgn1P18608 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgn1P18608 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgn1P18608 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgn1P18608 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgn1P18608 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgn1P18608 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Hmgn1P18608 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Hmgn1P18608 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.77□□□□□ -0.05
Hmgn1P18608 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgn1P18608 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.77□□□□□ -0.05
Hmgn1P18608 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgn1P18608 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.77□□□□□ -0.05
Hmgn1P18608 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Hmgn1P18608 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Hmgn1P18608 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgn1P18608 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgn1P18608 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgn1P18608 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgn1P18608 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgn1P18608 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.77□□□□□ -0.05
Hmgn1P18608 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgn1P18608 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.77□□□□□ -0.05
Hmgn1P18608 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgn1P18608 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgn1P18608 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgn1P18608 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgn1P18608 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgn1P18608 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Hmgn1P18608 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Hmgn1P18608 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgn1P18608 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgn1P18608 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgn1P18608 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgn1P18608 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Hmgn1P18608 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Hmgn1P18608 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgn1P18608 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgn1P18608 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.76□□□□□ -0.05
Hmgn1P18608 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.76□□□□□ -0.05
Hmgn1P18608 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgn1P18608 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.76□□□□□ -0.05
Hmgn1P18608 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.76□□□□□ -0.05
Hmgn1P18608 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgn1P18608 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.76□□□□□ -0.05
Hmgn1P18608 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Hmgn1P18608 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Hmgn1P18608 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgn1P18608 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgn1P18608 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgn1P18608 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Hmgn1P18608 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgn1P18608 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Hmgn1P18608 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgn1P18608 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgn1P18608 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgn1P18608 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgn1P18608 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgn1P18608 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgn1P18608 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgn1P18608 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgn1P18608 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Hmgn1P18608 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Hmgn1P18608 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgn1P18608 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgn1P18608 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgn1P18608 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgn1P18608 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Hmgn1P18608 Gm11539-201ENSMUST00000119837 557 ntBASIC14.75□□□□□ -0.05
Hmgn1P18608 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgn1P18608 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC14.75□□□□□ -0.05
Hmgn1P18608 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgn1P18608 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgn1P18608 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgn1P18608 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms