Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cd44P15379 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.96■□□□□ 0.31
Cd44P15379 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cd44P15379 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cd44P15379 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cd44P15379 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cd44P15379 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Cd44P15379 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cd44P15379 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cd44P15379 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cd44P15379 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cd44P15379 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cd44P15379 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
Cd44P15379 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cd44P15379 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Cd44P15379 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cd44P15379 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cd44P15379 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cd44P15379 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Cd44P15379 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Cd44P15379 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd44P15379 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.95■□□□□ 0.3
Cd44P15379 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.95■□□□□ 0.3
Cd44P15379 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd44P15379 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.95■□□□□ 0.3
Cd44P15379 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Cd44P15379 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Cd44P15379 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd44P15379 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd44P15379 Gm37055-201ENSMUST00000191866 133 ntBASIC16.95■□□□□ 0.3
Cd44P15379 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd44P15379 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd44P15379 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Cd44P15379 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cd44P15379 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cd44P15379 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd44P15379 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd44P15379 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd44P15379 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Cd44P15379 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Cd44P15379 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Cd44P15379 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd44P15379 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd44P15379 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
Cd44P15379 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd44P15379 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd44P15379 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Cd44P15379 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cd44P15379 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.94■□□□□ 0.3
Cd44P15379 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd44P15379 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd44P15379 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd44P15379 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd44P15379 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd44P15379 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd44P15379 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cd44P15379 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.94■□□□□ 0.3
Cd44P15379 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd44P15379 Gm13559-201ENSMUST00000120476 863 ntBASIC16.94■□□□□ 0.3
Cd44P15379 Gm13474-201ENSMUST00000122466 815 ntBASIC16.94■□□□□ 0.3
Cd44P15379 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.94■□□□□ 0.3
Cd44P15379 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd44P15379 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cd44P15379 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd44P15379 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd44P15379 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd44P15379 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd44P15379 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd44P15379 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd44P15379 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd44P15379 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.94■□□□□ 0.3
Cd44P15379 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd44P15379 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd44P15379 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cd44P15379 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd44P15379 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd44P15379 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd44P15379 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd44P15379 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cd44P15379 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cd44P15379 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cd44P15379 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cd44P15379 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cd44P15379 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Cd44P15379 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cd44P15379 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cd44P15379 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cd44P15379 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cd44P15379 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.93■□□□□ 0.3
Cd44P15379 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cd44P15379 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cd44P15379 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cd44P15379 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cd44P15379 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cd44P15379 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cd44P15379 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Cd44P15379 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd44P15379 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Cd44P15379 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd44P15379 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms